Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
UBR4Q5T4S7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
UBR4Q5T4S7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
UBR4Q5T4S7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
UBR4Q5T4S7 Y_RNA.25-201ENST00000362528 102 ntBASIC1.15□□□□□ -2.23
UBR4Q5T4S7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.15□□□□□ -2.23
UBR4Q5T4S7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC1.15□□□□□ -2.23
UBR4Q5T4S7 AC123904.3-201ENST00000547218 814 ntBASIC1.15□□□□□ -2.23
UBR4Q5T4S7 AC068135.2-201ENST00000569293 1028 ntBASIC1.15□□□□□ -2.23
UBR4Q5T4S7 Z82195.2-201ENST00000612348 18351 ntBASIC1.15□□□□□ -2.23
UBR4Q5T4S7 RNU6-716P-201ENST00000365621 103 ntBASIC1.15□□□□□ -2.23
UBR4Q5T4S7 RNA5SP107-201ENST00000411358 122 ntBASIC1.15□□□□□ -2.23
UBR4Q5T4S7 AL512504.1-201ENST00000415494 778 ntBASIC1.15□□□□□ -2.23
UBR4Q5T4S7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC1.15□□□□□ -2.23
UBR4Q5T4S7 RNU6-250P-201ENST00000516958 103 ntBASIC1.15□□□□□ -2.23
UBR4Q5T4S7 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.15□□□□□ -2.23
UBR4Q5T4S7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 RNU4-51P-201ENST00000364206 140 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 HMGB3P31-201ENST00000413333 595 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AC004022.1-201ENST00000447766 1066 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AC104229.1-201ENST00000561364 255 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AP000676.4-201ENST00000624659 623 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AL030996.1-201ENST00000411430 235 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 SCARNA1-201ENST00000517138 166 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AC090751.1-201ENST00000566966 267 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 MTND4P35-201ENST00000604257 1375 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 RNU1-35P-201ENST00000362782 153 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 MIR181B1-201ENST00000385240 110 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AC009474.2-201ENST00000451383 136 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 RNA5SP67-201ENST00000516422 131 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AC022882.1-201ENST00000532142 501 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 MIR4421-201ENST00000578133 69 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AL450489.1-201ENST00000612071 468 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 FER-202ENST00000438717 1531 ntTSL 2 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AC093831.2-201ENST00000624393 3427 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 SNORA67.5-201ENST00000391036 107 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 RNA5SP274-201ENST00000410484 108 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AL158825.1-201ENST00000414735 521 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AL445685.2-201ENST00000422551 342 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 AL158196.1-201ENST00000616786 434 ntBASIC1.14□□□□□ -2.23
UBR4Q5T4S7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.14□□□□□ -2.23
UBR4Q5T4S7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 SNRPGP12-201ENST00000449481 213 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 RNA5SP134-201ENST00000516492 96 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AL132857.1-201ENST00000555180 708 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 U73479.1-201ENST00000618062 168 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AC012640.5-201ENST00000623897 319 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AC005261.6-201ENST00000623072 1387 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 RNA5SP25-201ENST00000410815 110 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 FAR1P1-201ENST00000427163 934 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 MTAPP1-201ENST00000489154 819 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AC112191.3-201ENST00000604371 277 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AC093311.1-201ENST00000506586 2021 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 RNU1-42P-201ENST00000364033 160 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AL031663.1-201ENST00000437445 219 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 HMGB1P26-201ENST00000452520 628 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AP003072.2-201ENST00000527756 676 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AC068620.3-201ENST00000602749 560 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 MIR423-201ENST00000362201 94 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.13□□□□□ -2.23
UBR4Q5T4S7 AC103987.3-201ENST00000582071 292 ntBASIC1.13□□□□□ -2.23
UBR4Q5T4S7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 SNORA79B-201ENST00000410557 148 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 RPS6P15-201ENST00000431996 751 ntBASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.12□□□□□ -2.23
UBR4Q5T4S7 snoU13.3-201ENST00000459441 104 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms