Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 AC020895.1-201ENST00000595362 272 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 AC024560.3-201ENST00000608482 349 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 AL110115.1-201ENST00000614396 364 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 SNHG22-203ENST00000617833 660 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 AC026241.1-201ENST00000517873 2142 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 Y_RNA.338-201ENST00000365320 114 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 RNU6-167P-201ENST00000384292 106 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 ISCA1P6-201ENST00000427740 390 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 Z99714.1-201ENST00000450463 807 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.49□□□□□ -2.01
RFX7Q2KHR2 ISCA1P3-201ENST00000577104 373 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 AC011890.2-201ENST00000613393 294 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 AC034102.8-201ENST00000615146 484 ntBASIC2.49□□□□□ -2.01
RFX7Q2KHR2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RFX7Q2KHR2 RNA5SP393-201ENST00000363423 117 ntBASIC2.48□□□□□ -2.01
RFX7Q2KHR2 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RFX7Q2KHR2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.48□□□□□ -2.01
RFX7Q2KHR2 Z82209.1-201ENST00000422141 2135 ntBASIC2.48□□□□□ -2.01
RFX7Q2KHR2 AL121882.1-201ENST00000422893 417 ntBASIC2.48□□□□□ -2.01
RFX7Q2KHR2 RNU6-717P-201ENST00000459076 104 ntBASIC2.48□□□□□ -2.01
RFX7Q2KHR2 AC114982.2-201ENST00000461396 358 ntBASIC2.48□□□□□ -2.01
RFX7Q2KHR2 RPL23AP42-201ENST00000471152 471 ntBASIC2.48□□□□□ -2.01
RFX7Q2KHR2 AC010301.1-201ENST00000473936 355 ntBASIC2.48□□□□□ -2.01
RFX7Q2KHR2 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.48□□□□□ -2.01
RFX7Q2KHR2 RPL37P25-201ENST00000507308 276 ntBASIC2.48□□□□□ -2.01
RFX7Q2KHR2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.48□□□□□ -2.01
RFX7Q2KHR2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.48□□□□□ -2.01
RFX7Q2KHR2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RFX7Q2KHR2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.48□□□□□ -2.01
RFX7Q2KHR2 AP003385.6-201ENST00000531603 374 ntBASIC2.48□□□□□ -2.01
RFX7Q2KHR2 AC008083.2-201ENST00000546707 476 ntBASIC2.48□□□□□ -2.01
RFX7Q2KHR2 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC2.48□□□□□ -2.01
RFX7Q2KHR2 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.48□□□□□ -2.01
RFX7Q2KHR2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 Y_RNA.4-201ENST00000362333 112 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 RNU6-317P-201ENST00000384031 107 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AC240504.1-201ENST00000395709 845 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 ANAPC10P1-201ENST00000395991 556 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 MTCYBP29-201ENST00000436327 1006 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AC004866.2-201ENST00000438285 481 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 RPL23AP7-203ENST00000449021 469 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 MTND2P8-201ENST00000450555 1025 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AL021397.1-201ENST00000451806 248 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AC109486.1-201ENST00000486833 374 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 RNA5SP82-201ENST00000516707 92 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 RN7SKP277-201ENST00000516895 283 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AC009314.1-201ENST00000603871 304 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AC069304.3-201ENST00000603938 1084 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AC008962.1-201ENST00000605729 304 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 U73479.1-201ENST00000618062 168 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AC002543.1-201ENST00000299783 1954 ntBASIC2.47□□□□□ -2.01
RFX7Q2KHR2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RFX7Q2KHR2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
RFX7Q2KHR2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RFX7Q2KHR2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RFX7Q2KHR2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.46□□□□□ -2.02
RFX7Q2KHR2 AC092447.6-201ENST00000414578 210 ntBASIC2.46□□□□□ -2.02
RFX7Q2KHR2 USP9YP8-201ENST00000441913 500 ntBASIC2.46□□□□□ -2.02
RFX7Q2KHR2 HMGB1P48-201ENST00000446155 598 ntBASIC2.46□□□□□ -2.02
RFX7Q2KHR2 RPS23P3-201ENST00000470993 430 ntBASIC2.46□□□□□ -2.02
RFX7Q2KHR2 AP000852.1-201ENST00000472460 573 ntBASIC2.46□□□□□ -2.02
RFX7Q2KHR2 RPL38P4-201ENST00000502376 214 ntBASIC2.46□□□□□ -2.02
RFX7Q2KHR2 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.46□□□□□ -2.02
RFX7Q2KHR2 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.46□□□□□ -2.02
RFX7Q2KHR2 FAM92A1P1-201ENST00000528023 890 ntBASIC2.46□□□□□ -2.02
RFX7Q2KHR2 NOP56P3-201ENST00000549457 385 ntBASIC2.46□□□□□ -2.02
RFX7Q2KHR2 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.46□□□□□ -2.02
RFX7Q2KHR2 AMZ2P1-203ENST00000565833 850 ntBASIC2.46□□□□□ -2.02
RFX7Q2KHR2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RFX7Q2KHR2 AC245036.5-201ENST00000596330 847 ntBASIC2.46□□□□□ -2.02
RFX7Q2KHR2 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
RFX7Q2KHR2 AC135776.4-201ENST00000624300 1904 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms