Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MIR483-201ENST00000385070 76 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 AL158825.1-201ENST00000414735 521 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 AC009414.1-201ENST00000427200 443 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 RPL7L1P10-201ENST00000427790 463 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 NDUFB4P6-201ENST00000436819 366 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 AC087588.1-201ENST00000462203 316 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 AC090515.1-201ENST00000465295 476 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 RPS27P21-201ENST00000486977 252 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 EIF4EP3-201ENST00000498782 656 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 RNA5SP320-201ENST00000516263 124 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 HMGB1P6-201ENST00000569046 646 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 AC061975.8-201ENST00000587058 721 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 AC245100.7-201ENST00000609678 442 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 AC110792.4-201ENST00000609843 298 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HIST1H1AQ02539 AL109809.4-201ENST00000603520 2185 ntBASIC1.82□□□□□ -2.12
HIST1H1AQ02539 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 SNORA38-201ENST00000363946 132 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 Z92545.1-201ENST00000411782 234 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 TATDN1P1-201ENST00000414123 891 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 RPS3AP9-201ENST00000417027 792 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AL358075.3-201ENST00000426289 226 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 SRIP2-201ENST00000428470 166 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 RPL36P19-201ENST00000430744 301 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 RPL23AP83-201ENST00000434984 473 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AL831737.1-201ENST00000441288 271 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 RN7SL432P-201ENST00000484057 298 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 LINC00888-204ENST00000487386 421 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 GTF2IP9-201ENST00000502460 301 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AC104057.1-201ENST00000515547 497 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 MIR514B-201ENST00000516774 80 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 OR4R2P-201ENST00000530815 597 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AC023824.2-201ENST00000566185 400 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 VN1R92P-201ENST00000598511 928 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AC007621.1-201ENST00000604544 437 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AC067747.1-201ENST00000608026 250 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AC004852.3-201ENST00000614131 326 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AL031601.2-202ENST00000622650 282 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AC024023.1-201ENST00000624530 922 ntBASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HIST1H1AQ02539 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HIST1H1AQ02539 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HIST1H1AQ02539 SNORA5B-201ENST00000363786 132 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 RNU6-673P-201ENST00000365084 104 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 RNU6-821P-201ENST00000390995 107 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HIST1H1AQ02539 RNA5SP184-201ENST00000411071 108 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 HMGB3P2-201ENST00000411913 584 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AL356379.1-201ENST00000414105 126 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 RNF19BPX-201ENST00000426224 625 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC079780.1-201ENST00000428259 207 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 FCF1P1-201ENST00000432690 571 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 GPM6BP3-201ENST00000442797 145 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.8□□□□□ -2.12
HIST1H1AQ02539 BX248409.1-201ENST00000455497 255 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC097493.1-201ENST00000463958 372 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC096576.1-201ENST00000489014 359 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC022493.1-201ENST00000492984 337 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 CBX3P3-201ENST00000508108 532 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.8□□□□□ -2.12
HIST1H1AQ02539 RNA5SP356-201ENST00000515972 94 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.8□□□□□ -2.12
HIST1H1AQ02539 HMGB1P14-201ENST00000557424 591 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 MED28P6-201ENST00000558776 231 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.8□□□□□ -2.12
HIST1H1AQ02539 FAM60BP-201ENST00000578364 658 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AP005137.2-201ENST00000609238 400 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC079395.3-201ENST00000615161 484 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC027309.3-201ENST00000623419 351 ntBASIC1.8□□□□□ -2.12
HIST1H1AQ02539 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.8□□□□□ -2.12
HIST1H1AQ02539 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms