Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDC42EP1Q00587 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.44□□□□□ -1.7
CDC42EP1Q00587 AC104118.1-201ENST00000607625 1589 ntBASIC4.44□□□□□ -1.7
CDC42EP1Q00587 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDC42EP1Q00587 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 Y_RNA.88-201ENST00000363029 99 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 RNU6-1078P-201ENST00000364522 103 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 RNU6-867P-201ENST00000364956 107 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 RNU6-356P-201ENST00000384140 107 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 Y_RNA.573-201ENST00000384763 105 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 MIR19A-201ENST00000384878 82 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 MIR134-201ENST00000385258 73 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 RPL7P60-201ENST00000397636 735 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 RNU4-6P-201ENST00000410804 122 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 HMGN1P24-201ENST00000412282 298 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC092447.6-201ENST00000414578 210 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 USP9YP27-201ENST00000418455 438 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC137499.1-201ENST00000427602 88 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC007389.2-201ENST00000434630 306 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AL662791.1-201ENST00000441992 928 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 RPL21P103-201ENST00000479921 488 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC020893.1-201ENST00000502452 580 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 TMEM248P1-201ENST00000510579 951 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 RNU6-528P-201ENST00000516926 100 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC109635.3-201ENST00000529536 185 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AP003034.1-201ENST00000534621 422 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 CYCSP30-201ENST00000546447 172 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AL157687.1-201ENST00000554853 619 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC120057.2-201ENST00000571520 271 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC006130.2-201ENST00000586202 326 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC104662.1-201ENST00000604448 511 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AL136363.1-201ENST00000605349 337 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC007038.2-201ENST00000608095 740 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AP001596.2-201ENST00000608410 312 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC017083.3-201ENST00000609955 700 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 uc_338.12-201ENST00000616344 181 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC008785.1-201ENST00000624475 456 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 AC016588.2-201ENST00000632484 3021 ntBASIC4.43□□□□□ -1.7
CDC42EP1Q00587 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.43□□□□□ -1.7
CDC42EP1Q00587 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 RNY3P13-201ENST00000365542 102 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 Y_RNA.390-201ENST00000383932 102 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 USP9YP6-201ENST00000413550 854 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 MTCO1P20-201ENST00000425366 358 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC093156.1-201ENST00000440382 670 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 RPL23AP20-201ENST00000447965 421 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC108059.3-201ENST00000456388 214 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 UBDP1-202ENST00000457888 382 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC006517.1-201ENST00000480485 328 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC017037.1-201ENST00000508460 471 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 AC021146.1-201ENST00000511202 716 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 Y_RNA.693-201ENST00000516641 110 ntBASIC4.42□□□□□ -1.7
CDC42EP1Q00587 RNU6-1220P-201ENST00000517126 108 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms