Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RPL23AP38-201ENST00000423801 469 ntBASIC3.87□□□□□ -1.79
RAE1P78406 OR4K11P-201ENST00000431829 904 ntBASIC3.87□□□□□ -1.79
RAE1P78406 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RAE1P78406 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.87□□□□□ -1.79
RAE1P78406 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RAE1P78406 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.87□□□□□ -1.79
RAE1P78406 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.87□□□□□ -1.79
RAE1P78406 HMGB3P22-202ENST00000451823 572 ntBASIC3.87□□□□□ -1.79
RAE1P78406 UQCRHP4-201ENST00000471686 272 ntBASIC3.87□□□□□ -1.79
RAE1P78406 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.87□□□□□ -1.79
RAE1P78406 AC105137.1-201ENST00000484355 562 ntBASIC3.87□□□□□ -1.79
RAE1P78406 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RAE1P78406 RPS27AP13-201ENST00000498403 237 ntBASIC3.87□□□□□ -1.79
RAE1P78406 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.87□□□□□ -1.79
RAE1P78406 RNU6-1095P-201ENST00000516148 108 ntBASIC3.87□□□□□ -1.79
RAE1P78406 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.87□□□□□ -1.79
RAE1P78406 RNU6-1220P-201ENST00000517126 108 ntBASIC3.87□□□□□ -1.79
RAE1P78406 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.87□□□□□ -1.79
RAE1P78406 AC011979.2-201ENST00000527568 352 ntBASIC3.87□□□□□ -1.79
RAE1P78406 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.87□□□□□ -1.79
RAE1P78406 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.87□□□□□ -1.79
RAE1P78406 AL512360.1-201ENST00000555346 234 ntBASIC3.87□□□□□ -1.79
RAE1P78406 AL359212.1-201ENST00000556608 614 ntBASIC3.87□□□□□ -1.79
RAE1P78406 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.87□□□□□ -1.79
RAE1P78406 AC025678.1-201ENST00000567861 338 ntBASIC3.87□□□□□ -1.79
RAE1P78406 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.87□□□□□ -1.79
RAE1P78406 AC012669.1-201ENST00000603209 283 ntBASIC3.87□□□□□ -1.79
RAE1P78406 AC010680.3-201ENST00000604215 520 ntBASIC3.87□□□□□ -1.79
RAE1P78406 AL158211.4-201ENST00000606988 584 ntBASIC3.87□□□□□ -1.79
RAE1P78406 MIR6820-201ENST00000611508 62 ntBASIC3.87□□□□□ -1.79
RAE1P78406 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
RAE1P78406 LINC00901.1-201ENST00000617252 152 ntBASIC3.87□□□□□ -1.79
RAE1P78406 MIR8059-201ENST00000620427 81 ntBASIC3.87□□□□□ -1.79
RAE1P78406 AL023881.1-201ENST00000621088 301 ntBASIC3.87□□□□□ -1.79
RAE1P78406 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RAE1P78406 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RAE1P78406 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.87□□□□□ -1.79
RAE1P78406 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
RAE1P78406 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RAE1P78406 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RAE1P78406 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAE1P78406 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
RAE1P78406 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RAE1P78406 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAE1P78406 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RAE1P78406 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.86□□□□□ -1.79
RAE1P78406 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAE1P78406 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.86□□□□□ -1.79
RAE1P78406 Y_RNA.88-201ENST00000363029 99 ntBASIC3.86□□□□□ -1.79
RAE1P78406 SNORD35B-201ENST00000363660 87 ntBASIC3.86□□□□□ -1.79
RAE1P78406 RNU6-1090P-201ENST00000364065 94 ntBASIC3.86□□□□□ -1.79
RAE1P78406 RNU6-637P-201ENST00000384050 107 ntBASIC3.86□□□□□ -1.79
RAE1P78406 RNU6-456P-201ENST00000384493 107 ntBASIC3.86□□□□□ -1.79
RAE1P78406 Y_RNA.573-201ENST00000384763 105 ntBASIC3.86□□□□□ -1.79
RAE1P78406 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RAE1P78406 RNU6-712P-201ENST00000410558 100 ntBASIC3.86□□□□□ -1.79
RAE1P78406 RNU6-516P-201ENST00000411381 104 ntBASIC3.86□□□□□ -1.79
RAE1P78406 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.86□□□□□ -1.79
RAE1P78406 AL353193.1-201ENST00000421444 268 ntBASIC3.86□□□□□ -1.79
RAE1P78406 BEND7P1-201ENST00000422058 457 ntBASIC3.86□□□□□ -1.79
RAE1P78406 RPL18P10-201ENST00000425606 538 ntBASIC3.86□□□□□ -1.79
RAE1P78406 AC079781.2-201ENST00000446424 169 ntBASIC3.86□□□□□ -1.79
RAE1P78406 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.86□□□□□ -1.79
RAE1P78406 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.86□□□□□ -1.79
RAE1P78406 AC092989.1-201ENST00000481235 277 ntBASIC3.86□□□□□ -1.79
RAE1P78406 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RAE1P78406 RN7SL604P-201ENST00000492589 296 ntBASIC3.86□□□□□ -1.79
RAE1P78406 RPL7P23-201ENST00000493874 747 ntBASIC3.86□□□□□ -1.79
RAE1P78406 RPL29P14-201ENST00000495837 428 ntBASIC3.86□□□□□ -1.79
RAE1P78406 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.86□□□□□ -1.79
RAE1P78406 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RAE1P78406 RNU6-410P-201ENST00000517006 107 ntBASIC3.86□□□□□ -1.79
RAE1P78406 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.86□□□□□ -1.79
RAE1P78406 AC103783.1-201ENST00000520506 373 ntBASIC3.86□□□□□ -1.79
RAE1P78406 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.86□□□□□ -1.79
RAE1P78406 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.86□□□□□ -1.79
RAE1P78406 AC118273.2-201ENST00000532092 465 ntBASIC3.86□□□□□ -1.79
RAE1P78406 CYCSP29-201ENST00000533731 318 ntBASIC3.86□□□□□ -1.79
RAE1P78406 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.86□□□□□ -1.79
RAE1P78406 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.86□□□□□ -1.79
RAE1P78406 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.86□□□□□ -1.79
RAE1P78406 AC105224.1-201ENST00000587055 421 ntBASIC3.86□□□□□ -1.79
RAE1P78406 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.86□□□□□ -1.79
RAE1P78406 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.86□□□□□ -1.79
RAE1P78406 AC103710.2-201ENST00000609912 942 ntBASIC3.86□□□□□ -1.79
RAE1P78406 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.86□□□□□ -1.79
RAE1P78406 AL445567.2-201ENST00000618935 498 ntBASIC3.86□□□□□ -1.79
RAE1P78406 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.86□□□□□ -1.79
RAE1P78406 MIR1321-201ENST00000637766 79 ntBASIC3.86□□□□□ -1.79
RAE1P78406 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAE1P78406 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAE1P78406 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.86□□□□□ -1.79
RAE1P78406 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.86□□□□□ -1.79
RAE1P78406 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RAE1P78406 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RAE1P78406 AL356489.2-201ENST00000566968 3528 ntBASIC3.86□□□□□ -1.79
RAE1P78406 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
RAE1P78406 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RAE1P78406 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RAE1P78406 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms