Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
RPL39P62891 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
RPL39P62891 NUP58P1-201ENST00000502546 1738 ntBASIC1.04□□□□□ -2.24
RPL39P62891 MIR449A-201ENST00000362113 91 ntBASIC1.04□□□□□ -2.24
RPL39P62891 MIR627-201ENST00000384979 97 ntBASIC1.04□□□□□ -2.24
RPL39P62891 UBE2V1P2-201ENST00000397758 440 ntBASIC1.04□□□□□ -2.24
RPL39P62891 MIR1323-201ENST00000408090 73 ntBASIC1.04□□□□□ -2.24
RPL39P62891 RN7SKP51-201ENST00000410781 304 ntBASIC1.04□□□□□ -2.24
RPL39P62891 SNORD56-201ENST00000413522 71 ntBASIC1.04□□□□□ -2.24
RPL39P62891 VN1R108P-201ENST00000431580 830 ntBASIC1.04□□□□□ -2.24
RPL39P62891 RPS26P30-201ENST00000443431 335 ntBASIC1.04□□□□□ -2.24
RPL39P62891 AL627224.1-201ENST00000448334 444 ntBASIC1.04□□□□□ -2.24
RPL39P62891 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.04□□□□□ -2.24
RPL39P62891 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.04□□□□□ -2.24
RPL39P62891 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.04□□□□□ -2.24
RPL39P62891 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
RPL39P62891 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC1.04□□□□□ -2.24
RPL39P62891 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC1.04□□□□□ -2.24
RPL39P62891 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.04□□□□□ -2.24
RPL39P62891 AC024224.1-201ENST00000538284 609 ntBASIC1.04□□□□□ -2.24
RPL39P62891 AK6P1-201ENST00000540219 478 ntBASIC1.04□□□□□ -2.24
RPL39P62891 DNAJC8P1-201ENST00000554535 372 ntBASIC1.04□□□□□ -2.24
RPL39P62891 MIR4648-201ENST00000580107 72 ntBASIC1.04□□□□□ -2.24
RPL39P62891 AC002487.1-201ENST00000604565 994 ntBASIC1.04□□□□□ -2.24
RPL39P62891 AC010200.2-201ENST00000605098 235 ntBASIC1.04□□□□□ -2.24
RPL39P62891 MIR7974-201ENST00000615835 79 ntBASIC1.04□□□□□ -2.24
RPL39P62891 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.04□□□□□ -2.24
RPL39P62891 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.04□□□□□ -2.24
RPL39P62891 AC119674.1-212ENST00000641155 993 ntBASIC1.04□□□□□ -2.24
RPL39P62891 RMST-202ENST00000541282 2099 ntTSL 2 BASIC1.04□□□□□ -2.24
RPL39P62891 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
RPL39P62891 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.03□□□□□ -2.24
RPL39P62891 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.03□□□□□ -2.24
RPL39P62891 AC091564.4-201ENST00000533934 2194 ntBASIC1.03□□□□□ -2.24
RPL39P62891 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
RPL39P62891 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
RPL39P62891 RNU6-1027P-201ENST00000383998 107 ntBASIC1.03□□□□□ -2.24
RPL39P62891 RNU6-1181P-201ENST00000384191 106 ntBASIC1.03□□□□□ -2.24
RPL39P62891 MIR17-201ENST00000385012 84 ntBASIC1.03□□□□□ -2.24
RPL39P62891 MIR504-201ENST00000385065 83 ntBASIC1.03□□□□□ -2.24
RPL39P62891 AC068050.1-201ENST00000394891 380 ntBASIC1.03□□□□□ -2.24
RPL39P62891 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.03□□□□□ -2.24
RPL39P62891 GTF2IP7-202ENST00000436677 309 ntBASIC1.03□□□□□ -2.24
RPL39P62891 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.03□□□□□ -2.24
RPL39P62891 AMD1P1-201ENST00000457220 922 ntBASIC1.03□□□□□ -2.24
RPL39P62891 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.03□□□□□ -2.24
RPL39P62891 AC104685.1-201ENST00000502445 371 ntBASIC1.03□□□□□ -2.24
RPL39P62891 AC096745.1-201ENST00000509945 370 ntBASIC1.03□□□□□ -2.24
RPL39P62891 AC025768.1-201ENST00000510057 267 ntBASIC1.03□□□□□ -2.24
RPL39P62891 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.03□□□□□ -2.24
RPL39P62891 HMGB1P1-201ENST00000522557 636 ntBASIC1.03□□□□□ -2.24
RPL39P62891 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
RPL39P62891 AP004607.1-201ENST00000524456 203 ntBASIC1.03□□□□□ -2.24
RPL39P62891 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
RPL39P62891 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.03□□□□□ -2.24
RPL39P62891 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.03□□□□□ -2.24
RPL39P62891 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.03□□□□□ -2.24
RPL39P62891 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.03□□□□□ -2.24
RPL39P62891 AC009318.2-201ENST00000610917 651 ntBASIC1.03□□□□□ -2.24
RPL39P62891 AC073592.7-201ENST00000623659 507 ntBASIC1.03□□□□□ -2.24
RPL39P62891 AC011477.1-204ENST00000623416 1325 ntBASIC1.03□□□□□ -2.24
RPL39P62891 AL627390.1-201ENST00000396055 340 ntBASIC1.02□□□□□ -2.25
RPL39P62891 RNU6-1077P-201ENST00000410506 102 ntBASIC1.02□□□□□ -2.25
RPL39P62891 RN7SKP192-201ENST00000411291 327 ntBASIC1.02□□□□□ -2.25
RPL39P62891 AC007098.1-201ENST00000420122 367 ntBASIC1.02□□□□□ -2.25
RPL39P62891 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.02□□□□□ -2.25
RPL39P62891 AL358453.1-201ENST00000422522 250 ntBASIC1.02□□□□□ -2.25
RPL39P62891 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.02□□□□□ -2.25
RPL39P62891 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.02□□□□□ -2.25
RPL39P62891 AC233279.1-201ENST00000455300 423 ntBASIC1.02□□□□□ -2.25
RPL39P62891 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.02□□□□□ -2.25
RPL39P62891 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.02□□□□□ -2.25
RPL39P62891 AC068587.2-201ENST00000478386 781 ntBASIC1.02□□□□□ -2.25
RPL39P62891 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC1.02□□□□□ -2.25
RPL39P62891 RNU1-103P-201ENST00000516502 125 ntBASIC1.02□□□□□ -2.25
RPL39P62891 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.02□□□□□ -2.25
RPL39P62891 SMARCE1P4-201ENST00000523647 241 ntBASIC1.02□□□□□ -2.25
RPL39P62891 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.02□□□□□ -2.25
RPL39P62891 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.02□□□□□ -2.25
RPL39P62891 MIR4435-1-201ENST00000582552 80 ntBASIC1.02□□□□□ -2.25
RPL39P62891 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.02□□□□□ -2.25
RPL39P62891 AC135178.6-201ENST00000605314 398 ntBASIC1.02□□□□□ -2.25
RPL39P62891 AC007275.1-201ENST00000621243 671 ntBASIC1.02□□□□□ -2.25
RPL39P62891 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.02□□□□□ -2.25
RPL39P62891 U8.2-201ENST00000363156 134 ntBASIC1.01□□□□□ -2.25
RPL39P62891 SNORA14A-201ENST00000364773 135 ntBASIC1.01□□□□□ -2.25
RPL39P62891 RNU6-1140P-201ENST00000410517 106 ntBASIC1.01□□□□□ -2.25
RPL39P62891 SMC4P1-201ENST00000414479 527 ntBASIC1.01□□□□□ -2.25
RPL39P62891 AL354695.1-201ENST00000427935 228 ntBASIC1.01□□□□□ -2.25
RPL39P62891 AC090774.1-201ENST00000435925 246 ntBASIC1.01□□□□□ -2.25
RPL39P62891 PSPHP1-201ENST00000450062 261 ntBASIC1.01□□□□□ -2.25
RPL39P62891 AL139109.1-201ENST00000455491 297 ntBASIC1.01□□□□□ -2.25
RPL39P62891 AC092798.1-201ENST00000458542 409 ntBASIC1.01□□□□□ -2.25
RPL39P62891 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.01□□□□□ -2.25
RPL39P62891 AC020699.1-201ENST00000505161 445 ntBASIC1.01□□□□□ -2.25
RPL39P62891 AC113155.1-201ENST00000511141 769 ntBASIC1.01□□□□□ -2.25
RPL39P62891 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.01□□□□□ -2.25
RPL39P62891 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
RPL39P62891 AC093014.1-201ENST00000548926 724 ntBASIC1.01□□□□□ -2.25
RPL39P62891 ARL2BPP2-201ENST00000550907 489 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms