Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.43□□□□□ -2.18
RPS28P62857 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.43□□□□□ -2.18
RPS28P62857 DEFB122-202ENST00000569013 197 ntBASIC1.43□□□□□ -2.18
RPS28P62857 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC1.43□□□□□ -2.18
RPS28P62857 GAS5-AS1-201ENST00000602767 694 ntBASIC1.43□□□□□ -2.18
RPS28P62857 AC015849.2-201ENST00000605738 409 ntBASIC1.43□□□□□ -2.18
RPS28P62857 AC013562.2-201ENST00000611632 603 ntBASIC1.43□□□□□ -2.18
RPS28P62857 MIR6883-201ENST00000614952 78 ntBASIC1.43□□□□□ -2.18
RPS28P62857 AC107905.1-201ENST00000616204 426 ntBASIC1.43□□□□□ -2.18
RPS28P62857 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC1.43□□□□□ -2.18
RPS28P62857 AC010608.2-201ENST00000624830 470 ntBASIC1.43□□□□□ -2.18
RPS28P62857 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.43□□□□□ -2.18
RPS28P62857 AC127502.3-201ENST00000636170 1206 ntBASIC1.43□□□□□ -2.18
RPS28P62857 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
RPS28P62857 AC025263.3-201ENST00000622965 1396 ntBASIC1.43□□□□□ -2.18
RPS28P62857 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
RPS28P62857 HSPA8P4-201ENST00000511877 1920 ntBASIC1.42□□□□□ -2.18
RPS28P62857 MTCO1P18-201ENST00000455518 1419 ntBASIC1.42□□□□□ -2.18
RPS28P62857 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
RPS28P62857 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RPS28P62857 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RPS28P62857 MIR525-201ENST00000384978 85 ntBASIC1.42□□□□□ -2.18
RPS28P62857 AL139039.1-201ENST00000401900 692 ntBASIC1.42□□□□□ -2.18
RPS28P62857 AL121978.1-201ENST00000402778 359 ntBASIC1.42□□□□□ -2.18
RPS28P62857 AL162578.1-201ENST00000406202 378 ntBASIC1.42□□□□□ -2.18
RPS28P62857 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.42□□□□□ -2.18
RPS28P62857 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.42□□□□□ -2.18
RPS28P62857 EDDM3CP-201ENST00000415977 425 ntBASIC1.42□□□□□ -2.18
RPS28P62857 AC096649.2-201ENST00000416186 393 ntBASIC1.42□□□□□ -2.18
RPS28P62857 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.42□□□□□ -2.18
RPS28P62857 BEND7P1-201ENST00000422058 457 ntBASIC1.42□□□□□ -2.18
RPS28P62857 RPS15AP29-201ENST00000445539 400 ntBASIC1.42□□□□□ -2.18
RPS28P62857 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.42□□□□□ -2.18
RPS28P62857 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.42□□□□□ -2.18
RPS28P62857 MTND2P24-201ENST00000453434 806 ntBASIC1.42□□□□□ -2.18
RPS28P62857 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.42□□□□□ -2.18
RPS28P62857 LARP1BP2-201ENST00000486594 519 ntBASIC1.42□□□□□ -2.18
RPS28P62857 RN7SL810P-201ENST00000493031 276 ntBASIC1.42□□□□□ -2.18
RPS28P62857 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.42□□□□□ -2.18
RPS28P62857 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RPS28P62857 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
RPS28P62857 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.42□□□□□ -2.18
RPS28P62857 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.42□□□□□ -2.18
RPS28P62857 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.42□□□□□ -2.18
RPS28P62857 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC1.42□□□□□ -2.18
RPS28P62857 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.42□□□□□ -2.18
RPS28P62857 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.42□□□□□ -2.18
RPS28P62857 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC1.42□□□□□ -2.18
RPS28P62857 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
RPS28P62857 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC1.42□□□□□ -2.18
RPS28P62857 HSBP1P1-201ENST00000555205 166 ntBASIC1.42□□□□□ -2.18
RPS28P62857 MEG8-215ENST00000555354 469 ntTSL 3 BASIC1.42□□□□□ -2.18
RPS28P62857 MIR2682-201ENST00000580305 110 ntBASIC1.42□□□□□ -2.18
RPS28P62857 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.42□□□□□ -2.18
RPS28P62857 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.42□□□□□ -2.18
RPS28P62857 TUG1_1.1-201ENST00000610654 145 ntBASIC1.42□□□□□ -2.18
RPS28P62857 AL121612.2-201ENST00000612261 482 ntBASIC1.42□□□□□ -2.18
RPS28P62857 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC1.42□□□□□ -2.18
RPS28P62857 AC008443.7-201ENST00000622195 246 ntBASIC1.42□□□□□ -2.18
RPS28P62857 MIR3651-201ENST00000630427 90 ntBASIC1.42□□□□□ -2.18
RPS28P62857 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.42□□□□□ -2.18
RPS28P62857 AC009487.4-201ENST00000624969 3585 ntBASIC1.42□□□□□ -2.18
RPS28P62857 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
RPS28P62857 AL356473.1-201ENST00000406203 1408 ntBASIC1.41□□□□□ -2.18
RPS28P62857 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC1.41□□□□□ -2.18
RPS28P62857 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
RPS28P62857 RN7SKP275-201ENST00000364626 301 ntBASIC1.41□□□□□ -2.18
RPS28P62857 SNORD15B-201ENST00000384714 146 ntBASIC1.41□□□□□ -2.18
RPS28P62857 MIR143-201ENST00000385300 106 ntBASIC1.41□□□□□ -2.18
RPS28P62857 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RPS28P62857 HMGB1P17-201ENST00000403495 628 ntBASIC1.41□□□□□ -2.18
RPS28P62857 RNA5SP178-201ENST00000410380 128 ntBASIC1.41□□□□□ -2.18
RPS28P62857 RNU2-47P-201ENST00000410649 186 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC1.41□□□□□ -2.18
RPS28P62857 RPL35AP24-201ENST00000413846 330 ntBASIC1.41□□□□□ -2.18
RPS28P62857 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.41□□□□□ -2.18
RPS28P62857 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AL691449.1-201ENST00000426570 421 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AC104837.2-201ENST00000427236 424 ntBASIC1.41□□□□□ -2.18
RPS28P62857 RPL30P4-201ENST00000429309 333 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.41□□□□□ -2.18
RPS28P62857 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.41□□□□□ -2.18
RPS28P62857 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC1.41□□□□□ -2.18
RPS28P62857 Z82210.1-201ENST00000440037 231 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.41□□□□□ -2.18
RPS28P62857 AC098818.1-201ENST00000478593 252 ntBASIC1.41□□□□□ -2.18
RPS28P62857 HSPE1P6-201ENST00000479457 291 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AC105137.1-201ENST00000484355 562 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AC055855.1-201ENST00000489563 579 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AC104685.1-201ENST00000502445 371 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AC024558.1-201ENST00000505008 528 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC1.41□□□□□ -2.18
RPS28P62857 SNORA31.6-201ENST00000516241 130 ntBASIC1.41□□□□□ -2.18
RPS28P62857 RNU6-970P-201ENST00000516312 107 ntBASIC1.41□□□□□ -2.18
RPS28P62857 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.41□□□□□ -2.18
RPS28P62857 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.41□□□□□ -2.18
RPS28P62857 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.41□□□□□ -2.18
RPS28P62857 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC1.41□□□□□ -2.18
RPS28P62857 SETP7-201ENST00000552169 453 ntBASIC1.41□□□□□ -2.18
RPS28P62857 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms