Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 FRG2DP-202ENST00000566967 323 ntBASIC5.08□□□□□ -1.6
RTP1P59025 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.08□□□□□ -1.6
RTP1P59025 AP001029.3-201ENST00000588063 596 ntBASIC5.08□□□□□ -1.6
RTP1P59025 AC006116.10-201ENST00000591836 581 ntBASIC5.08□□□□□ -1.6
RTP1P59025 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.08□□□□□ -1.6
RTP1P59025 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.08□□□□□ -1.6
RTP1P59025 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.08□□□□□ -1.6
RTP1P59025 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.08□□□□□ -1.6
RTP1P59025 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.08□□□□□ -1.6
RTP1P59025 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTP1P59025 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTP1P59025 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTP1P59025 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTP1P59025 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTP1P59025 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTP1P59025 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTP1P59025 AC073343.1-201ENST00000328239 651 ntBASIC5.07□□□□□ -1.6
RTP1P59025 MIR383-201ENST00000362257 73 ntBASIC5.07□□□□□ -1.6
RTP1P59025 Y_RNA.145-201ENST00000363527 102 ntBASIC5.07□□□□□ -1.6
RTP1P59025 SNORA33.2-201ENST00000365413 134 ntBASIC5.07□□□□□ -1.6
RTP1P59025 RNU4-20P-201ENST00000365601 151 ntBASIC5.07□□□□□ -1.6
RTP1P59025 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RTP1P59025 MIR514A2-201ENST00000385131 88 ntBASIC5.07□□□□□ -1.6
RTP1P59025 MIR514A3-201ENST00000385132 88 ntBASIC5.07□□□□□ -1.6
RTP1P59025 AL583835.1-201ENST00000399570 407 ntBASIC5.07□□□□□ -1.6
RTP1P59025 SNORA11.1-201ENST00000408133 129 ntBASIC5.07□□□□□ -1.6
RTP1P59025 SNORA11F-201ENST00000408237 128 ntBASIC5.07□□□□□ -1.6
RTP1P59025 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.07□□□□□ -1.6
RTP1P59025 HSPE1P1-201ENST00000421494 318 ntBASIC5.07□□□□□ -1.6
RTP1P59025 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTP1P59025 RPL23AP38-201ENST00000423801 469 ntBASIC5.07□□□□□ -1.6
RTP1P59025 AC137499.1-201ENST00000427602 88 ntBASIC5.07□□□□□ -1.6
RTP1P59025 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.07□□□□□ -1.6
RTP1P59025 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.07□□□□□ -1.6
RTP1P59025 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.07□□□□□ -1.6
RTP1P59025 AC022431.1-201ENST00000450941 438 ntBASIC5.07□□□□□ -1.6
RTP1P59025 AL445433.1-201ENST00000457507 257 ntBASIC5.07□□□□□ -1.6
RTP1P59025 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
RTP1P59025 AC090096.1-201ENST00000489168 390 ntBASIC5.07□□□□□ -1.6
RTP1P59025 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.07□□□□□ -1.6
RTP1P59025 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.07□□□□□ -1.6
RTP1P59025 SNORD27.1-201ENST00000516319 72 ntBASIC5.07□□□□□ -1.6
RTP1P59025 Y_RNA.711-201ENST00000516993 102 ntBASIC5.07□□□□□ -1.6
RTP1P59025 SUMO2P20-201ENST00000520803 283 ntBASIC5.07□□□□□ -1.6
RTP1P59025 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC5.07□□□□□ -1.6
RTP1P59025 OR5BN1P-201ENST00000532955 829 ntBASIC5.07□□□□□ -1.6
RTP1P59025 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.07□□□□□ -1.6
RTP1P59025 SULT1C2P2-201ENST00000562517 294 ntBASIC5.07□□□□□ -1.6
RTP1P59025 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.07□□□□□ -1.6
RTP1P59025 AC008737.2-201ENST00000599446 118 ntBASIC5.07□□□□□ -1.6
RTP1P59025 AC000123.2-201ENST00000623124 461 ntBASIC5.07□□□□□ -1.6
RTP1P59025 AC138305.3-201ENST00000624988 240 ntBASIC5.07□□□□□ -1.6
RTP1P59025 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTP1P59025 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.07□□□□□ -1.6
RTP1P59025 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTP1P59025 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.07□□□□□ -1.6
RTP1P59025 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
RTP1P59025 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTP1P59025 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTP1P59025 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RTP1P59025 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RTP1P59025 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.06□□□□□ -1.6
RTP1P59025 AC097714.1-201ENST00000511272 1647 ntBASIC5.06□□□□□ -1.6
RTP1P59025 AL391684.1-202ENST00000641293 1636 ntBASIC5.06□□□□□ -1.6
RTP1P59025 MIR372-201ENST00000362225 67 ntBASIC5.06□□□□□ -1.6
RTP1P59025 Y_RNA.146-201ENST00000363549 102 ntBASIC5.06□□□□□ -1.6
RTP1P59025 RNU4-48P-201ENST00000365559 182 ntBASIC5.06□□□□□ -1.6
RTP1P59025 RNU6-1207P-201ENST00000384343 107 ntBASIC5.06□□□□□ -1.6
RTP1P59025 RNU2-62P-201ENST00000410868 191 ntBASIC5.06□□□□□ -1.6
RTP1P59025 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.06□□□□□ -1.6
RTP1P59025 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.06□□□□□ -1.6
RTP1P59025 RPL31P45-201ENST00000419532 356 ntBASIC5.06□□□□□ -1.6
RTP1P59025 OR1AA1P-201ENST00000419597 916 ntBASIC5.06□□□□□ -1.6
RTP1P59025 MTCO2P27-201ENST00000420740 428 ntBASIC5.06□□□□□ -1.6
RTP1P59025 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.06□□□□□ -1.6
RTP1P59025 Z82205.1-201ENST00000428456 297 ntBASIC5.06□□□□□ -1.6
RTP1P59025 AL590233.1-201ENST00000430017 456 ntBASIC5.06□□□□□ -1.6
RTP1P59025 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.06□□□□□ -1.6
RTP1P59025 HMGB1P15-201ENST00000453854 435 ntBASIC5.06□□□□□ -1.6
RTP1P59025 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.06□□□□□ -1.6
RTP1P59025 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.06□□□□□ -1.6
RTP1P59025 AC005741.1-201ENST00000511094 432 ntBASIC5.06□□□□□ -1.6
RTP1P59025 AC114797.1-201ENST00000514003 728 ntBASIC5.06□□□□□ -1.6
RTP1P59025 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.06□□□□□ -1.6
RTP1P59025 AC105417.1-201ENST00000514691 285 ntBASIC5.06□□□□□ -1.6
RTP1P59025 RNU4-29P-201ENST00000515943 174 ntBASIC5.06□□□□□ -1.6
RTP1P59025 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.06□□□□□ -1.6
RTP1P59025 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.06□□□□□ -1.6
RTP1P59025 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.06□□□□□ -1.6
RTP1P59025 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.06□□□□□ -1.6
RTP1P59025 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.06□□□□□ -1.6
RTP1P59025 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.06□□□□□ -1.6
RTP1P59025 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.06□□□□□ -1.6
RTP1P59025 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.06□□□□□ -1.6
RTP1P59025 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.06□□□□□ -1.6
RTP1P59025 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.06□□□□□ -1.6
RTP1P59025 UBE2L4-201ENST00000587688 464 ntBASIC5.06□□□□□ -1.6
RTP1P59025 GLUD1P4-201ENST00000590914 418 ntBASIC5.06□□□□□ -1.6
RTP1P59025 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.06□□□□□ -1.6
RTP1P59025 AC024220.1-201ENST00000603675 484 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms