Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC093767.1-201ENST00000504523 156 ntBASIC3.3□□□□□ -1.88
PEX3P56589 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
PEX3P56589 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.3□□□□□ -1.88
PEX3P56589 RNA5SP380-201ENST00000517190 98 ntBASIC3.3□□□□□ -1.88
PEX3P56589 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.3□□□□□ -1.88
PEX3P56589 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.3□□□□□ -1.88
PEX3P56589 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.3□□□□□ -1.88
PEX3P56589 AC022080.3-201ENST00000544433 482 ntBASIC3.3□□□□□ -1.88
PEX3P56589 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.3□□□□□ -1.88
PEX3P56589 AC090888.2-201ENST00000559765 1144 ntBASIC3.3□□□□□ -1.88
PEX3P56589 H3F3AP1-201ENST00000559984 334 ntBASIC3.3□□□□□ -1.88
PEX3P56589 AC009712.1-201ENST00000564938 316 ntBASIC3.3□□□□□ -1.88
PEX3P56589 AL354943.1-201ENST00000572103 781 ntBASIC3.3□□□□□ -1.88
PEX3P56589 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.3□□□□□ -1.88
PEX3P56589 AL669831.4-202ENST00000590817 238 ntBASIC3.3□□□□□ -1.88
PEX3P56589 BNIP3P24-201ENST00000593398 557 ntBASIC3.3□□□□□ -1.88
PEX3P56589 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.3□□□□□ -1.88
PEX3P56589 AC103881.1-201ENST00000603476 538 ntBASIC3.3□□□□□ -1.88
PEX3P56589 AC112220.3-201ENST00000605502 502 ntBASIC3.3□□□□□ -1.88
PEX3P56589 AL139418.1-201ENST00000613613 177 ntBASIC3.3□□□□□ -1.88
PEX3P56589 AC008147.4-201ENST00000617570 1204 ntBASIC3.3□□□□□ -1.88
PEX3P56589 PLCE1P1-201ENST00000622094 305 ntBASIC3.3□□□□□ -1.88
PEX3P56589 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.3□□□□□ -1.88
PEX3P56589 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PEX3P56589 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PEX3P56589 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PEX3P56589 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PEX3P56589 GDI2P1-201ENST00000429312 1336 ntBASIC3.29□□□□□ -1.88
PEX3P56589 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PEX3P56589 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PEX3P56589 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PEX3P56589 AC006548.1-201ENST00000427470 102 ntBASIC3.29□□□□□ -1.88
PEX3P56589 AC022018.1-201ENST00000430685 241 ntBASIC3.29□□□□□ -1.88
PEX3P56589 RPS25P9-201ENST00000435591 252 ntBASIC3.29□□□□□ -1.88
PEX3P56589 FTH1P1-201ENST00000437933 532 ntBASIC3.29□□□□□ -1.88
PEX3P56589 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.29□□□□□ -1.88
PEX3P56589 ANKRD26P4-201ENST00000455755 950 ntBASIC3.29□□□□□ -1.88
PEX3P56589 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.29□□□□□ -1.88
PEX3P56589 RPS29P2-201ENST00000479278 136 ntBASIC3.29□□□□□ -1.88
PEX3P56589 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.29□□□□□ -1.88
PEX3P56589 KCTD9P5-201ENST00000504141 1170 ntBASIC3.29□□□□□ -1.88
PEX3P56589 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.29□□□□□ -1.88
PEX3P56589 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PEX3P56589 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.29□□□□□ -1.88
PEX3P56589 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.29□□□□□ -1.88
PEX3P56589 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.29□□□□□ -1.88
PEX3P56589 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.29□□□□□ -1.88
PEX3P56589 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.29□□□□□ -1.88
PEX3P56589 AL158042.1-201ENST00000605338 460 ntBASIC3.29□□□□□ -1.88
PEX3P56589 TUSC7.1-201ENST00000610969 165 ntBASIC3.29□□□□□ -1.88
PEX3P56589 AC073968.1-201ENST00000618594 637 ntBASIC3.29□□□□□ -1.88
PEX3P56589 CR381572.1-201ENST00000625098 102 ntBASIC3.29□□□□□ -1.88
PEX3P56589 CYP3A51P-201ENST00000633513 256 ntBASIC3.29□□□□□ -1.88
PEX3P56589 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.29□□□□□ -1.88
PEX3P56589 NUP58P1-201ENST00000502546 1738 ntBASIC3.29□□□□□ -1.88
PEX3P56589 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PEX3P56589 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PEX3P56589 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
PEX3P56589 AC000403.1-201ENST00000613696 3585 ntBASIC3.28□□□□□ -1.88
PEX3P56589 OR4G11P-202ENST00000642116 1414 ntBASIC3.28□□□□□ -1.88
PEX3P56589 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PEX3P56589 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PEX3P56589 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PEX3P56589 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PEX3P56589 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PEX3P56589 OR5H2-201ENST00000355273 945 ntBASIC3.28□□□□□ -1.88
PEX3P56589 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PEX3P56589 RNA5SP295-201ENST00000362655 121 ntBASIC3.28□□□□□ -1.88
PEX3P56589 RNU6-931P-201ENST00000363850 107 ntBASIC3.28□□□□□ -1.88
PEX3P56589 RNU1-140P-201ENST00000365040 165 ntBASIC3.28□□□□□ -1.88
PEX3P56589 SNRPEP2-201ENST00000397592 279 ntBASIC3.28□□□□□ -1.88
PEX3P56589 RPL31P1-201ENST00000398116 372 ntBASIC3.28□□□□□ -1.88
PEX3P56589 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.28□□□□□ -1.88
PEX3P56589 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.28□□□□□ -1.88
PEX3P56589 MIR1284-201ENST00000408337 120 ntBASIC3.28□□□□□ -1.88
PEX3P56589 RPL7P8-201ENST00000411964 730 ntBASIC3.28□□□□□ -1.88
PEX3P56589 VPS26BP1-201ENST00000417155 755 ntBASIC3.28□□□□□ -1.88
PEX3P56589 AC005005.2-201ENST00000420779 380 ntBASIC3.28□□□□□ -1.88
PEX3P56589 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.28□□□□□ -1.88
PEX3P56589 EZH2P1-201ENST00000431167 291 ntBASIC3.28□□□□□ -1.88
PEX3P56589 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.28□□□□□ -1.88
PEX3P56589 OR2B8P-201ENST00000432841 938 ntBASIC3.28□□□□□ -1.88
PEX3P56589 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.28□□□□□ -1.88
PEX3P56589 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.28□□□□□ -1.88
PEX3P56589 RPL7P23-201ENST00000493874 747 ntBASIC3.28□□□□□ -1.88
PEX3P56589 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PEX3P56589 TMEM251P1-201ENST00000503717 318 ntBASIC3.28□□□□□ -1.88
PEX3P56589 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.28□□□□□ -1.88
PEX3P56589 HSPE1P23-201ENST00000509838 286 ntBASIC3.28□□□□□ -1.88
PEX3P56589 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.28□□□□□ -1.88
PEX3P56589 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
PEX3P56589 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.28□□□□□ -1.88
PEX3P56589 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.28□□□□□ -1.88
PEX3P56589 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.28□□□□□ -1.88
PEX3P56589 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.28□□□□□ -1.88
PEX3P56589 HSPA8P13-201ENST00000523715 472 ntBASIC3.28□□□□□ -1.88
PEX3P56589 DEFB131D-201ENST00000526803 184 ntBASIC3.28□□□□□ -1.88
PEX3P56589 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.28□□□□□ -1.88
PEX3P56589 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.28□□□□□ -1.88
PEX3P56589 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms