Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.91□□□□□ -1.78
HDAC4P56524 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.91□□□□□ -1.78
HDAC4P56524 RPL21P66-201ENST00000426566 466 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 AL591419.1-201ENST00000427423 339 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.91□□□□□ -1.78
HDAC4P56524 MTCYBP45-201ENST00000435243 565 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 MTND1P28-201ENST00000435623 950 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.91□□□□□ -1.78
HDAC4P56524 GDI2P2-201ENST00000445131 608 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 BMI1P1-201ENST00000445879 941 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.91□□□□□ -1.78
HDAC4P56524 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.91□□□□□ -1.78
HDAC4P56524 SNRPGP9-201ENST00000456025 225 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 AP001992.1-205ENST00000462248 379 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 AC010285.1-201ENST00000470580 392 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 AC023424.2-201ENST00000493479 777 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.91□□□□□ -1.78
HDAC4P56524 MTND4P2-201ENST00000507767 1203 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 CBX3P3-201ENST00000508108 532 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 TXNP6-201ENST00000510190 310 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.91□□□□□ -1.78
HDAC4P56524 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.91□□□□□ -1.78
HDAC4P56524 AC109635.4-202ENST00000531666 412 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.91□□□□□ -1.78
HDAC4P56524 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.91□□□□□ -1.78
HDAC4P56524 EEF1B2P4-201ENST00000551398 348 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 AL845331.3-202ENST00000562856 261 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 AC006362.1-201ENST00000567392 174 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.91□□□□□ -1.78
HDAC4P56524 AC112187.2-201ENST00000604345 283 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 AL596245.1-201ENST00000618994 362 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 AC048347.1-201ENST00000624621 427 ntBASIC3.91□□□□□ -1.78
HDAC4P56524 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.91□□□□□ -1.78
HDAC4P56524 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.91□□□□□ -1.78
HDAC4P56524 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
HDAC4P56524 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HDAC4P56524 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HDAC4P56524 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HDAC4P56524 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.9□□□□□ -1.78
HDAC4P56524 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HDAC4P56524 AL161781.1-201ENST00000354277 403 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HDAC4P56524 SNORD51-201ENST00000384320 80 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 RNU6-769P-201ENST00000384407 104 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HDAC4P56524 MTCYBP36-201ENST00000404146 440 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 HSPE1P8-201ENST00000406997 288 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HDAC4P56524 RPS7P15-201ENST00000415804 584 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 RAD23BP2-201ENST00000416003 1207 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC4P56524 RPL21P109-201ENST00000422213 475 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC4P56524 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC4P56524 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC4P56524 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC4P56524 AL031667.1-201ENST00000440222 725 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC4P56524 USP9YP29-201ENST00000445112 563 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC006480.1-201ENST00000449887 378 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AL445669.2-201ENST00000454425 421 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 BTF3P5-201ENST00000457252 467 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 RPS4XP10-201ENST00000465034 731 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC021678.1-201ENST00000505195 936 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC022447.3-201ENST00000506865 495 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 NPM1P41-201ENST00000512920 831 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC093677.1-201ENST00000514414 678 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 MTCO2P32-201ENST00000514865 403 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC4P56524 SNORA31.20-201ENST00000517111 133 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.9□□□□□ -1.79
HDAC4P56524 AC007991.1-201ENST00000522680 631 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AP004247.1-201ENST00000531556 1289 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC013828.2-201ENST00000532487 235 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.9□□□□□ -1.79
HDAC4P56524 AC090615.1-201ENST00000577519 154 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 MIR5685-201ENST00000579080 79 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AL353997.4-201ENST00000586196 166 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 RNU1-30P-201ENST00000606575 163 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC103591.3-201ENST00000608684 209 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC012360.2-201ENST00000609349 391 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC005344.1-201ENST00000613391 459 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC104010.1-201ENST00000616889 150 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC018755.4-201ENST00000619715 454 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC244100.1-202ENST00000621554 382 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 AC091925.2-201ENST00000625059 256 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.9□□□□□ -1.79
HDAC4P56524 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HDAC4P56524 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HDAC4P56524 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
HDAC4P56524 AL365440.1-201ENST00000436135 2167 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HDAC4P56524 AC004925.1-201ENST00000624256 2706 ntBASIC3.9□□□□□ -1.79
HDAC4P56524 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.9□□□□□ -1.79
HDAC4P56524 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.9□□□□□ -1.79
HDAC4P56524 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HDAC4P56524 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HDAC4P56524 GABPAP-201ENST00000419271 1356 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms