Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA3P55318 EIF4EP3-201ENST00000498782 656 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 XKRY-201ENST00000510392 1100 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.72□□□□□ -2.13
FOXA3P55318 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
FOXA3P55318 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA3P55318 HMGB1P14-201ENST00000557424 591 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 AC011260.1-201ENST00000578420 472 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.72□□□□□ -2.13
FOXA3P55318 AC093732.2-201ENST00000607950 274 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.72□□□□□ -2.13
FOXA3P55318 AC073968.1-201ENST00000618594 637 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 AC012640.5-201ENST00000623897 319 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 U6.107-201ENST00000637108 79 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 OR8B1P-202ENST00000641132 1178 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 AP000553.5-201ENST00000641933 54 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
FOXA3P55318 AC009487.4-201ENST00000624969 3585 ntBASIC1.72□□□□□ -2.13
FOXA3P55318 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
FOXA3P55318 AC104446.1-201ENST00000613728 1321 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 HSPE1P11-201ENST00000339579 310 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 SNORA68.1-201ENST00000364537 132 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
FOXA3P55318 RNU6-891P-201ENST00000384280 111 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 U3.40-201ENST00000408706 208 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.71□□□□□ -2.14
FOXA3P55318 RPL27AP8-201ENST00000424277 446 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXA3P55318 MTCO1P39-201ENST00000426148 480 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 SDR42E1P3-201ENST00000438345 502 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
FOXA3P55318 AC092685.1-201ENST00000447960 1243 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 AC104978.1-201ENST00000449387 391 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 BX248409.1-201ENST00000455497 255 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.71□□□□□ -2.14
FOXA3P55318 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
FOXA3P55318 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
FOXA3P55318 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXA3P55318 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXA3P55318 AC026436.1-201ENST00000510537 270 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 HMGB1P47-201ENST00000511281 589 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXA3P55318 RN7SKP132-201ENST00000516001 208 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 RNA5SP320-201ENST00000516263 124 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 SNORA70.16-201ENST00000516390 95 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 SNORA31.13-201ENST00000516624 135 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 MIR514B-201ENST00000516774 80 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 GLYCAM1-201ENST00000546596 285 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXA3P55318 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.71□□□□□ -2.14
FOXA3P55318 HMGB1P6-201ENST00000569046 646 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 MIR5007-201ENST00000583098 95 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXA3P55318 MIMT1-201ENST00000597105 1050 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 MTCO3P22-201ENST00000603219 784 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.71□□□□□ -2.14
FOXA3P55318 AC239803.2-201ENST00000610161 430 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 AC004852.3-201ENST00000614131 326 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 AL391597.1-201ENST00000618707 694 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.71□□□□□ -2.14
FOXA3P55318 AL031601.2-202ENST00000622650 282 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 AP006248.3-201ENST00000623580 594 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 AL022578.1-201ENST00000439330 1433 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.71□□□□□ -2.14
FOXA3P55318 MTND4P35-201ENST00000604257 1375 ntBASIC1.71□□□□□ -2.14
FOXA3P55318 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
FOXA3P55318 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
FOXA3P55318 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
FOXA3P55318 MTND4P1-201ENST00000457501 1466 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 OR56A5-201ENST00000340110 738 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
FOXA3P55318 RNU6-730P-201ENST00000383954 104 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 RNU4-52P-201ENST00000384209 138 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 MIR767-201ENST00000390228 109 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 MTND4LP20-201ENST00000402379 270 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 AL136372.1-201ENST00000403060 228 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 RNU2-52P-201ENST00000410680 190 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.7□□□□□ -2.14
FOXA3P55318 COTL1P1-201ENST00000422309 375 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 HMGN2P38-201ENST00000423806 265 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 RPL7P44-201ENST00000424827 742 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXA3P55318 FCF1P1-201ENST00000432690 571 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 RPS15AP28-201ENST00000435088 386 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 ARPC3P1-201ENST00000437218 533 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 AP000936.2-201ENST00000447151 681 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 AL358232.1-201ENST00000448030 501 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 RSL24D1P3-201ENST00000449255 495 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.7□□□□□ -2.14
FOXA3P55318 RNU6-717P-201ENST00000459076 104 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 RPS27P21-201ENST00000486977 252 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 AC034159.1-201ENST00000513885 583 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXA3P55318 RNU6-202P-201ENST00000515998 96 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 AC025755.1-201ENST00000521306 278 ntBASIC1.7□□□□□ -2.14
FOXA3P55318 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXA3P55318 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXA3P55318 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXA3P55318 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.7□□□□□ -2.14
FOXA3P55318 AC023824.2-201ENST00000566185 400 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms