Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH6P55285 RPL23AP11-201ENST00000475260 469 ntBASIC2.86□□□□□ -1.95
CDH6P55285 AC080014.1-201ENST00000496877 1201 ntBASIC2.86□□□□□ -1.95
CDH6P55285 HIGD1AP13-201ENST00000509878 289 ntBASIC2.86□□□□□ -1.95
CDH6P55285 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH6P55285 RNU5A-7P-201ENST00000515979 116 ntBASIC2.86□□□□□ -1.95
CDH6P55285 SNORA70.16-201ENST00000516390 95 ntBASIC2.86□□□□□ -1.95
CDH6P55285 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH6P55285 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CDH6P55285 HSPE1P20-201ENST00000538133 289 ntBASIC2.86□□□□□ -1.95
CDH6P55285 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH6P55285 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH6P55285 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDH6P55285 AADACP1-206ENST00000561502 1193 ntBASIC2.86□□□□□ -1.95
CDH6P55285 CYCSP39-201ENST00000565821 309 ntBASIC2.86□□□□□ -1.95
CDH6P55285 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH6P55285 AL451007.1-201ENST00000595491 289 ntBASIC2.86□□□□□ -1.95
CDH6P55285 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH6P55285 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH6P55285 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDH6P55285 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH6P55285 AC092447.7-201ENST00000422212 1621 ntBASIC2.86□□□□□ -1.95
CDH6P55285 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CDH6P55285 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDH6P55285 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDH6P55285 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDH6P55285 RNU6-882P-201ENST00000391025 103 ntBASIC2.85□□□□□ -1.95
CDH6P55285 RNU6-1300P-201ENST00000391046 108 ntBASIC2.85□□□□□ -1.95
CDH6P55285 AC096664.2-201ENST00000411843 406 ntBASIC2.85□□□□□ -1.95
CDH6P55285 AL592148.1-201ENST00000413568 445 ntBASIC2.85□□□□□ -1.95
CDH6P55285 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.85□□□□□ -1.95
CDH6P55285 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH6P55285 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH6P55285 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH6P55285 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH6P55285 AL121871.1-201ENST00000443413 436 ntBASIC2.85□□□□□ -1.95
CDH6P55285 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.85□□□□□ -1.95
CDH6P55285 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH6P55285 VN1R10P-201ENST00000447106 875 ntBASIC2.85□□□□□ -1.95
CDH6P55285 USP9YP34-201ENST00000453983 808 ntBASIC2.85□□□□□ -1.95
CDH6P55285 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH6P55285 RN7SL499P-201ENST00000481141 276 ntBASIC2.85□□□□□ -1.95
CDH6P55285 AC103975.1-201ENST00000482506 483 ntBASIC2.85□□□□□ -1.95
CDH6P55285 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH6P55285 RPL21P131-201ENST00000497298 483 ntBASIC2.85□□□□□ -1.95
CDH6P55285 AC026414.1-201ENST00000504046 698 ntBASIC2.85□□□□□ -1.95
CDH6P55285 DSTNP2-201ENST00000504533 515 ntBASIC2.85□□□□□ -1.95
CDH6P55285 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CDH6P55285 AC098799.2-201ENST00000509466 868 ntBASIC2.85□□□□□ -1.95
CDH6P55285 OR5AK1P-201ENST00000524837 922 ntBASIC2.85□□□□□ -1.95
CDH6P55285 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH6P55285 CYB5AP5-201ENST00000549779 389 ntBASIC2.85□□□□□ -1.95
CDH6P55285 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.85□□□□□ -1.95
CDH6P55285 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.85□□□□□ -1.95
CDH6P55285 LARP7P2-201ENST00000575306 125 ntBASIC2.85□□□□□ -1.95
CDH6P55285 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CDH6P55285 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH6P55285 BNIP3P24-201ENST00000593398 557 ntBASIC2.85□□□□□ -1.95
CDH6P55285 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.85□□□□□ -1.95
CDH6P55285 RPL23AP88-201ENST00000605759 454 ntBASIC2.85□□□□□ -1.95
CDH6P55285 AL627309.6-201ENST00000606857 840 ntBASIC2.85□□□□□ -1.95
CDH6P55285 AC135507.2-201ENST00000612443 309 ntBASIC2.85□□□□□ -1.95
CDH6P55285 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.85□□□□□ -1.95
CDH6P55285 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CDH6P55285 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CDH6P55285 OR4G11P-202ENST00000642116 1414 ntBASIC2.85□□□□□ -1.95
CDH6P55285 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.84□□□□□ -1.95
CDH6P55285 AC091564.4-201ENST00000533934 2194 ntBASIC2.84□□□□□ -1.95
CDH6P55285 SNORD56.5-201ENST00000364281 72 ntBASIC2.84□□□□□ -1.95
CDH6P55285 RNU2-72P-201ENST00000411175 163 ntBASIC2.84□□□□□ -1.95
CDH6P55285 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH6P55285 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH6P55285 AL135938.1-201ENST00000443141 297 ntBASIC2.84□□□□□ -1.95
CDH6P55285 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH6P55285 AL031183.1-201ENST00000457667 207 ntBASIC2.84□□□□□ -1.95
CDH6P55285 AC092757.1-201ENST00000467293 467 ntBASIC2.84□□□□□ -1.95
CDH6P55285 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.84□□□□□ -1.95
CDH6P55285 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CDH6P55285 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
CDH6P55285 AC125611.2-201ENST00000551907 647 ntBASIC2.84□□□□□ -1.95
CDH6P55285 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH6P55285 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.84□□□□□ -1.95
CDH6P55285 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.84□□□□□ -1.95
CDH6P55285 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.84□□□□□ -1.95
CDH6P55285 VN1R87P-201ENST00000596706 487 ntBASIC2.84□□□□□ -1.95
CDH6P55285 AL035411.2-201ENST00000604022 421 ntBASIC2.84□□□□□ -1.95
CDH6P55285 AL031176.1-201ENST00000604554 466 ntBASIC2.84□□□□□ -1.95
CDH6P55285 AC008277.2-201ENST00000605196 797 ntBASIC2.84□□□□□ -1.95
CDH6P55285 AP001521.1-201ENST00000609150 300 ntBASIC2.84□□□□□ -1.95
CDH6P55285 AC008759.3-201ENST00000613300 508 ntBASIC2.84□□□□□ -1.95
CDH6P55285 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH6P55285 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.84□□□□□ -1.95
CDH6P55285 AC068880.4-201ENST00000623082 495 ntBASIC2.84□□□□□ -1.95
CDH6P55285 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.84□□□□□ -1.95
CDH6P55285 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.84□□□□□ -1.96
CDH6P55285 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CDH6P55285 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CDH6P55285 Y_RNA.110-201ENST00000363220 99 ntBASIC2.83□□□□□ -1.96
CDH6P55285 RNA5SP252-201ENST00000391131 119 ntBASIC2.83□□□□□ -1.96
CDH6P55285 AL138827.1-201ENST00000402666 306 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms