Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL645939.1-201ENST00000453429 797 ntBASIC4.16□□□□□ -1.74
COPB1P53618 AC110792.1-201ENST00000491826 472 ntBASIC4.16□□□□□ -1.74
COPB1P53618 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.16□□□□□ -1.74
COPB1P53618 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.16□□□□□ -1.74
COPB1P53618 RNU6-201P-201ENST00000517100 61 ntBASIC4.16□□□□□ -1.74
COPB1P53618 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.16□□□□□ -1.74
COPB1P53618 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COPB1P53618 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.16□□□□□ -1.74
COPB1P53618 AC025884.1-201ENST00000556034 378 ntBASIC4.16□□□□□ -1.74
COPB1P53618 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.16□□□□□ -1.74
COPB1P53618 AC009101.1-201ENST00000568135 242 ntBASIC4.16□□□□□ -1.74
COPB1P53618 MIR3682-201ENST00000581338 84 ntBASIC4.16□□□□□ -1.74
COPB1P53618 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.16□□□□□ -1.74
COPB1P53618 AL591034.3-201ENST00000605511 685 ntBASIC4.16□□□□□ -1.74
COPB1P53618 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.16□□□□□ -1.74
COPB1P53618 AC068880.5-201ENST00000624331 290 ntBASIC4.16□□□□□ -1.74
COPB1P53618 MIR492-201ENST00000638676 116 ntBASIC4.16□□□□□ -1.74
COPB1P53618 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
COPB1P53618 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.16□□□□□ -1.74
COPB1P53618 MAPK10-372ENST00000641954 3413 ntBASIC4.16□□□□□ -1.74
COPB1P53618 AC092447.10-201ENST00000620607 1652 ntBASIC4.16□□□□□ -1.74
COPB1P53618 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
COPB1P53618 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.15□□□□□ -1.74
COPB1P53618 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
COPB1P53618 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
COPB1P53618 RNY4P34-201ENST00000364779 95 ntBASIC4.15□□□□□ -1.75
COPB1P53618 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.15□□□□□ -1.75
COPB1P53618 MIR134-201ENST00000385258 73 ntBASIC4.15□□□□□ -1.75
COPB1P53618 AL391417.1-201ENST00000404100 426 ntBASIC4.15□□□□□ -1.75
COPB1P53618 BTBD10P2-201ENST00000404779 676 ntBASIC4.15□□□□□ -1.75
COPB1P53618 CIR1P3-201ENST00000405137 479 ntBASIC4.15□□□□□ -1.75
COPB1P53618 RPL21P65-201ENST00000406094 466 ntBASIC4.15□□□□□ -1.75
COPB1P53618 AC078974.1-201ENST00000411597 223 ntBASIC4.15□□□□□ -1.75
COPB1P53618 RPL31P2-201ENST00000413849 377 ntBASIC4.15□□□□□ -1.75
COPB1P53618 SPA17P1-201ENST00000416656 452 ntBASIC4.15□□□□□ -1.75
COPB1P53618 RPL31P45-201ENST00000419532 356 ntBASIC4.15□□□□□ -1.75
COPB1P53618 RPL30P3-201ENST00000424262 333 ntBASIC4.15□□□□□ -1.75
COPB1P53618 USP9YP36-201ENST00000424581 829 ntBASIC4.15□□□□□ -1.75
COPB1P53618 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.15□□□□□ -1.75
COPB1P53618 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.15□□□□□ -1.75
COPB1P53618 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.15□□□□□ -1.75
COPB1P53618 AC079448.1-201ENST00000449377 373 ntBASIC4.15□□□□□ -1.75
COPB1P53618 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.15□□□□□ -1.75
COPB1P53618 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.15□□□□□ -1.75
COPB1P53618 AC013267.1-201ENST00000458227 267 ntBASIC4.15□□□□□ -1.75
COPB1P53618 AP001992.1-205ENST00000462248 379 ntBASIC4.15□□□□□ -1.75
COPB1P53618 AP001025.2-201ENST00000490908 477 ntBASIC4.15□□□□□ -1.75
COPB1P53618 AC034222.1-201ENST00000494052 532 ntBASIC4.15□□□□□ -1.75
COPB1P53618 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.15□□□□□ -1.75
COPB1P53618 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.15□□□□□ -1.75
COPB1P53618 TXNP6-201ENST00000510190 310 ntBASIC4.15□□□□□ -1.75
COPB1P53618 PTGES3P3-201ENST00000511479 482 ntBASIC4.15□□□□□ -1.75
COPB1P53618 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.15□□□□□ -1.75
COPB1P53618 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.15□□□□□ -1.75
COPB1P53618 RNU6-714P-201ENST00000516963 103 ntBASIC4.15□□□□□ -1.75
COPB1P53618 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.15□□□□□ -1.75
COPB1P53618 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.15□□□□□ -1.75
COPB1P53618 AP003181.2-201ENST00000528941 181 ntBASIC4.15□□□□□ -1.75
COPB1P53618 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.15□□□□□ -1.75
COPB1P53618 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.15□□□□□ -1.75
COPB1P53618 AL391840.1-201ENST00000571144 367 ntBASIC4.15□□□□□ -1.75
COPB1P53618 SNORA59B-202ENST00000578183 701 ntBASIC4.15□□□□□ -1.75
COPB1P53618 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.15□□□□□ -1.75
COPB1P53618 SNORA62.6-201ENST00000606322 83 ntBASIC4.15□□□□□ -1.75
COPB1P53618 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.15□□□□□ -1.75
COPB1P53618 AC110994.2-201ENST00000635481 492 ntBASIC4.15□□□□□ -1.75
COPB1P53618 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
COPB1P53618 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
COPB1P53618 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.15□□□□□ -1.75
COPB1P53618 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
COPB1P53618 SAGE2P-201ENST00000420011 2126 ntBASIC4.15□□□□□ -1.75
COPB1P53618 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
COPB1P53618 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
COPB1P53618 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
COPB1P53618 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
COPB1P53618 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
COPB1P53618 RNU6-28P-201ENST00000362378 107 ntBASIC4.14□□□□□ -1.75
COPB1P53618 Y_RNA.296-201ENST00000364930 108 ntBASIC4.14□□□□□ -1.75
COPB1P53618 SNORA62.3-201ENST00000365110 153 ntBASIC4.14□□□□□ -1.75
COPB1P53618 RNU6-878P-201ENST00000384578 110 ntBASIC4.14□□□□□ -1.75
COPB1P53618 MIR554-201ENST00000384874 96 ntBASIC4.14□□□□□ -1.75
COPB1P53618 SNORD115-47-201ENST00000391226 86 ntBASIC4.14□□□□□ -1.75
COPB1P53618 RNA5SP317-201ENST00000410176 116 ntBASIC4.14□□□□□ -1.75
COPB1P53618 RNA5SP311-201ENST00000411290 116 ntBASIC4.14□□□□□ -1.75
COPB1P53618 RNU6-195P-201ENST00000411352 109 ntBASIC4.14□□□□□ -1.75
COPB1P53618 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.14□□□□□ -1.75
COPB1P53618 MTATP6P27-201ENST00000416987 621 ntBASIC4.14□□□□□ -1.75
COPB1P53618 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.14□□□□□ -1.75
COPB1P53618 AL035410.1-201ENST00000427409 427 ntBASIC4.14□□□□□ -1.75
COPB1P53618 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.14□□□□□ -1.75
COPB1P53618 PSMA6P3-201ENST00000428242 164 ntBASIC4.14□□□□□ -1.75
COPB1P53618 AL358934.1-201ENST00000432346 324 ntBASIC4.14□□□□□ -1.75
COPB1P53618 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.14□□□□□ -1.75
COPB1P53618 MTCYBP45-201ENST00000435243 565 ntBASIC4.14□□□□□ -1.75
COPB1P53618 RPL22P17-201ENST00000438729 315 ntBASIC4.14□□□□□ -1.75
COPB1P53618 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.14□□□□□ -1.75
COPB1P53618 Z99127.3-201ENST00000448158 395 ntBASIC4.14□□□□□ -1.75
COPB1P53618 AC099563.1-201ENST00000456086 418 ntBASIC4.14□□□□□ -1.75
COPB1P53618 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.14□□□□□ -1.75
COPB1P53618 AC022034.3-201ENST00000471393 478 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms