Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MFSD8-233ENST00000641482 4860 ntBASIC2.99□□□□□ -1.93
HCFC1P51610 PABPC1P7-201ENST00000413177 1513 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HCFC1P51610 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HCFC1P51610 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.98□□□□□ -1.93
HCFC1P51610 Y_RNA.553-201ENST00000384670 102 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 UBA52P6-201ENST00000399822 382 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.98□□□□□ -1.93
HCFC1P51610 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.98□□□□□ -1.93
HCFC1P51610 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.98□□□□□ -1.93
HCFC1P51610 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.98□□□□□ -1.93
HCFC1P51610 BX890604.2-201ENST00000427883 474 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 RPL23AP69-201ENST00000431134 458 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.98□□□□□ -1.93
HCFC1P51610 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.98□□□□□ -1.93
HCFC1P51610 RPL23AP35-201ENST00000451906 501 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC099563.1-201ENST00000456086 418 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 RPL37P6-202ENST00000464216 403 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC087879.1-201ENST00000474343 374 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC106872.3-201ENST00000495104 446 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.98□□□□□ -1.93
HCFC1P51610 RNU6-27P-201ENST00000516146 107 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.98□□□□□ -1.93
HCFC1P51610 AP006245.1-201ENST00000522549 120 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HCFC1P51610 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.98□□□□□ -1.93
HCFC1P51610 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.98□□□□□ -1.93
HCFC1P51610 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC2.98□□□□□ -1.93
HCFC1P51610 CBX3P5-201ENST00000552017 521 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.98□□□□□ -1.93
HCFC1P51610 AC067852.3-201ENST00000589177 561 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.98□□□□□ -1.93
HCFC1P51610 AC073544.2-201ENST00000601155 540 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.98□□□□□ -1.93
HCFC1P51610 WISP1-OT1-201ENST00000602893 642 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC079089.3-201ENST00000603094 673 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AP001521.1-201ENST00000609150 300 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC100793.4-201ENST00000613683 429 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 MIR6864-201ENST00000617935 70 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC079228.1-201ENST00000624774 1049 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HCFC1P51610 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HCFC1P51610 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
HCFC1P51610 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HCFC1P51610 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HCFC1P51610 EXOC5P1-201ENST00000510543 1969 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.98□□□□□ -1.93
HCFC1P51610 RNU6-501P-201ENST00000364072 100 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 RNU6-289P-201ENST00000364093 107 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 CRP-203ENST00000368111 512 ntTSL 3 BASIC2.98□□□□□ -1.93
HCFC1P51610 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
HCFC1P51610 Y_RNA.505-201ENST00000384489 102 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 HMGN2P8-201ENST00000391458 268 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AL023807.1-201ENST00000407932 359 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.98□□□□□ -1.93
HCFC1P51610 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.98□□□□□ -1.93
HCFC1P51610 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.98□□□□□ -1.93
HCFC1P51610 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.98□□□□□ -1.93
HCFC1P51610 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.98□□□□□ -1.93
HCFC1P51610 AL353706.1-201ENST00000436728 494 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.98□□□□□ -1.93
HCFC1P51610 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.98□□□□□ -1.93
HCFC1P51610 RPL23AP62-201ENST00000463396 453 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.98□□□□□ -1.93
HCFC1P51610 PTGES3P3-201ENST00000511479 482 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.98□□□□□ -1.93
HCFC1P51610 MTND3P5-201ENST00000512798 333 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 MTND5P4-201ENST00000514978 288 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 RN7SKP277-201ENST00000516895 283 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 SNORA48.10-201ENST00000516965 160 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.98□□□□□ -1.93
HCFC1P51610 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.98□□□□□ -1.93
HCFC1P51610 HIGD1AP1-201ENST00000550979 275 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.98□□□□□ -1.93
HCFC1P51610 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.98□□□□□ -1.93
HCFC1P51610 AC091489.2-201ENST00000566263 604 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AGGF1P4-201ENST00000568249 801 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 MIR5697-201ENST00000578045 78 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.98□□□□□ -1.93
HCFC1P51610 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.98□□□□□ -1.93
HCFC1P51610 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.98□□□□□ -1.93
HCFC1P51610 AC080013.4-201ENST00000607624 649 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HCFC1P51610 AC027807.2-201ENST00000616099 408 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.98□□□□□ -1.93
HCFC1P51610 AL732618.1-201ENST00000623251 301 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 AC018692.3-201ENST00000623929 123 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC2.98□□□□□ -1.93
HCFC1P51610 FAM157B-203ENST00000639350 358 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HCFC1P51610 ELL2P4-201ENST00000446870 1376 ntBASIC2.98□□□□□ -1.93
HCFC1P51610 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HCFC1P51610 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HCFC1P51610 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HCFC1P51610 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HCFC1P51610 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
HCFC1P51610 Y_RNA.97-201ENST00000363094 102 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms