Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CENPAP49450 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 AC139713.2-214ENST00000642059 1811 ntBASIC3.7□□□□□ -1.82
CENPAP49450 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
CENPAP49450 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.7□□□□□ -1.82
CENPAP49450 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
CENPAP49450 U8.3-201ENST00000363321 132 ntBASIC3.7□□□□□ -1.82
CENPAP49450 RNU6-335P-201ENST00000364563 113 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 MIR192-201ENST00000384915 110 ntBASIC3.7□□□□□ -1.82
CENPAP49450 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.7□□□□□ -1.82
CENPAP49450 RNU6-648P-201ENST00000410190 107 ntBASIC3.7□□□□□ -1.82
CENPAP49450 RNU4-25P-201ENST00000410569 230 ntBASIC3.7□□□□□ -1.82
CENPAP49450 RN7SKP33-201ENST00000410942 340 ntBASIC3.7□□□□□ -1.82
CENPAP49450 HMGN1P24-201ENST00000412282 298 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AF274854.1-201ENST00000413236 615 ntBASIC3.7□□□□□ -1.82
CENPAP49450 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 BX295541.1-201ENST00000417774 250 ntBASIC3.7□□□□□ -1.82
CENPAP49450 OR5BE1P-201ENST00000425977 939 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AL589872.1-201ENST00000426602 288 ntBASIC3.7□□□□□ -1.82
CENPAP49450 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.7□□□□□ -1.82
CENPAP49450 AL049734.2-201ENST00000441066 616 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.7□□□□□ -1.82
CENPAP49450 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.7□□□□□ -1.82
CENPAP49450 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.7□□□□□ -1.82
CENPAP49450 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.7□□□□□ -1.82
CENPAP49450 RNA5SP246-201ENST00000458909 119 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AC109327.1-201ENST00000471666 403 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AC055855.1-201ENST00000489563 579 ntBASIC3.7□□□□□ -1.82
CENPAP49450 RPL23AP55-201ENST00000498163 452 ntBASIC3.7□□□□□ -1.82
CENPAP49450 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AC093840.1-201ENST00000511599 336 ntBASIC3.7□□□□□ -1.82
CENPAP49450 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.7□□□□□ -1.82
CENPAP49450 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.7□□□□□ -1.82
CENPAP49450 RNU6-1095P-201ENST00000516148 108 ntBASIC3.7□□□□□ -1.82
CENPAP49450 RN7SKP244-201ENST00000516513 307 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AP004371.1-201ENST00000525240 214 ntBASIC3.7□□□□□ -1.82
CENPAP49450 MTCYBP41-201ENST00000528913 1123 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.7□□□□□ -1.82
CENPAP49450 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.7□□□□□ -1.82
CENPAP49450 AL121603.1-201ENST00000553815 142 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.7□□□□□ -1.82
CENPAP49450 AL845331.3-202ENST00000562856 261 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AC009063.1-201ENST00000563342 702 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AC022655.2-201ENST00000577280 318 ntBASIC3.7□□□□□ -1.82
CENPAP49450 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.7□□□□□ -1.82
CENPAP49450 DUXAP4-201ENST00000603046 613 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AL158211.4-201ENST00000606988 584 ntBASIC3.7□□□□□ -1.82
CENPAP49450 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.7□□□□□ -1.82
CENPAP49450 AC087241.4-201ENST00000612441 480 ntBASIC3.7□□□□□ -1.82
CENPAP49450 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.7□□□□□ -1.82
CENPAP49450 PISRT1-201ENST00000626175 531 ntBASIC3.7□□□□□ -1.82
CENPAP49450 SNORA50A-202ENST00000629536 136 ntBASIC3.7□□□□□ -1.82
CENPAP49450 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.7□□□□□ -1.82
CENPAP49450 OR5BE1P-202ENST00000641168 1176 ntBASIC3.7□□□□□ -1.82
CENPAP49450 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CENPAP49450 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CENPAP49450 AC027514.1-201ENST00000588561 1603 ntBASIC3.7□□□□□ -1.82
CENPAP49450 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CENPAP49450 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CENPAP49450 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.69□□□□□ -1.82
CENPAP49450 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CENPAP49450 SNORA60-201ENST00000362396 134 ntBASIC3.69□□□□□ -1.82
CENPAP49450 RNVU1-6-201ENST00000364688 164 ntBASIC3.69□□□□□ -1.82
CENPAP49450 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CENPAP49450 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
CENPAP49450 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CENPAP49450 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CENPAP49450 RNU6-259P-201ENST00000383999 107 ntBASIC3.69□□□□□ -1.82
CENPAP49450 SNORA37-201ENST00000384504 129 ntBASIC3.69□□□□□ -1.82
CENPAP49450 RPS4XP9-201ENST00000405151 780 ntBASIC3.69□□□□□ -1.82
CENPAP49450 MIR1251-201ENST00000408552 70 ntBASIC3.69□□□□□ -1.82
CENPAP49450 Y_RNA.599-201ENST00000410489 109 ntBASIC3.69□□□□□ -1.82
CENPAP49450 RNU2-8P-201ENST00000410727 190 ntBASIC3.69□□□□□ -1.82
CENPAP49450 RNA5SP306-201ENST00000411087 107 ntBASIC3.69□□□□□ -1.82
CENPAP49450 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.69□□□□□ -1.82
CENPAP49450 RPS7P15-201ENST00000415804 584 ntBASIC3.69□□□□□ -1.82
CENPAP49450 CCDC58P2-201ENST00000417131 366 ntBASIC3.69□□□□□ -1.82
CENPAP49450 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.69□□□□□ -1.82
CENPAP49450 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.69□□□□□ -1.82
CENPAP49450 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.69□□□□□ -1.82
CENPAP49450 AC083863.1-201ENST00000438811 231 ntBASIC3.69□□□□□ -1.82
CENPAP49450 CBX1P1-201ENST00000440184 427 ntBASIC3.69□□□□□ -1.82
CENPAP49450 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.69□□□□□ -1.82
CENPAP49450 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.69□□□□□ -1.82
CENPAP49450 RPS17P13-201ENST00000448974 407 ntBASIC3.69□□□□□ -1.82
CENPAP49450 AC010655.1-201ENST00000449336 292 ntBASIC3.69□□□□□ -1.82
CENPAP49450 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.69□□□□□ -1.82
CENPAP49450 MTND1P9-201ENST00000453775 944 ntBASIC3.69□□□□□ -1.82
CENPAP49450 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms