Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.8□□□□□ -2.12
RPL28P46779 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.8□□□□□ -2.12
RPL28P46779 RFC5P1-201ENST00000454419 874 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.8□□□□□ -2.12
RPL28P46779 AC092798.1-201ENST00000458542 409 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AP000852.1-201ENST00000472460 573 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AC117440.1-201ENST00000474107 571 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AC126182.1-201ENST00000478134 357 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.8□□□□□ -2.12
RPL28P46779 RPS27P26-201ENST00000494583 239 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AC117522.3-201ENST00000507974 584 ntBASIC1.8□□□□□ -2.12
RPL28P46779 OR5BM1P-201ENST00000512021 366 ntBASIC1.8□□□□□ -2.12
RPL28P46779 RNU6-885P-201ENST00000516607 104 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPL28P46779 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPL28P46779 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RPL28P46779 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.8□□□□□ -2.12
RPL28P46779 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.8□□□□□ -2.12
RPL28P46779 AC093519.1-201ENST00000566109 298 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AC010546.1-201ENST00000569391 485 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC1.8□□□□□ -2.12
RPL28P46779 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.8□□□□□ -2.12
RPL28P46779 MIR3921-201ENST00000577308 85 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AC015688.2-201ENST00000584523 262 ntBASIC1.8□□□□□ -2.12
RPL28P46779 RN7SL622P-201ENST00000585292 275 ntBASIC1.8□□□□□ -2.12
RPL28P46779 ZNF861P-201ENST00000588126 639 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AC012493.2-201ENST00000595083 291 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.8□□□□□ -2.12
RPL28P46779 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.8□□□□□ -2.12
RPL28P46779 AC015871.2-201ENST00000603605 948 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AC007179.3-201ENST00000604976 235 ntBASIC1.8□□□□□ -2.12
RPL28P46779 HNRNPDLP4-201ENST00000605144 301 ntBASIC1.8□□□□□ -2.12
RPL28P46779 YPEL5P2-201ENST00000605553 359 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AL392048.1-201ENST00000613946 534 ntBASIC1.8□□□□□ -2.12
RPL28P46779 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC1.8□□□□□ -2.12
RPL28P46779 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.8□□□□□ -2.12
RPL28P46779 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
RPL28P46779 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
RPL28P46779 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RPL28P46779 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
RPL28P46779 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RPL28P46779 RNU6-270P-201ENST00000364131 105 ntBASIC1.79□□□□□ -2.12
RPL28P46779 RNU1-100P-201ENST00000365255 165 ntBASIC1.79□□□□□ -2.12
RPL28P46779 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.79□□□□□ -2.12
RPL28P46779 RNU6-481P-201ENST00000384194 107 ntBASIC1.79□□□□□ -2.12
RPL28P46779 MIR135A2-201ENST00000384854 100 ntBASIC1.79□□□□□ -2.12
RPL28P46779 ARF4P3-201ENST00000397387 509 ntBASIC1.79□□□□□ -2.12
RPL28P46779 TMSB4XP8-201ENST00000402089 135 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AL513475.1-201ENST00000406602 315 ntBASIC1.79□□□□□ -2.12
RPL28P46779 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RPL28P46779 TMSB4XP6-201ENST00000415187 135 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AC246680.2-201ENST00000422106 389 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.79□□□□□ -2.12
RPL28P46779 TMSB4XP1-201ENST00000424567 135 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AC009414.1-201ENST00000427200 443 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.79□□□□□ -2.12
RPL28P46779 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.79□□□□□ -2.12
RPL28P46779 AC024082.2-201ENST00000434771 238 ntBASIC1.79□□□□□ -2.12
RPL28P46779 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.79□□□□□ -2.12
RPL28P46779 AL714022.1-201ENST00000439897 151 ntBASIC1.79□□□□□ -2.12
RPL28P46779 RPS3AP12-201ENST00000443616 753 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AC073901.1-201ENST00000462471 408 ntBASIC1.79□□□□□ -2.12
RPL28P46779 RPL32P14-201ENST00000463196 378 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AC116337.2-201ENST00000477662 156 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RPL28P46779 AC109464.2-201ENST00000510242 943 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AL359273.1-201ENST00000510918 627 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AC010625.1-201ENST00000511296 403 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.79□□□□□ -2.12
RPL28P46779 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.79□□□□□ -2.12
RPL28P46779 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.79□□□□□ -2.12
RPL28P46779 RNU5A-7P-201ENST00000515979 116 ntBASIC1.79□□□□□ -2.12
RPL28P46779 SNORA31.11-201ENST00000516528 139 ntBASIC1.79□□□□□ -2.12
RPL28P46779 RNU6-798P-201ENST00000516912 103 ntBASIC1.79□□□□□ -2.12
RPL28P46779 SNORA70.24-201ENST00000517233 118 ntBASIC1.79□□□□□ -2.12
RPL28P46779 RN7SKP57-201ENST00000517248 293 ntBASIC1.79□□□□□ -2.12
RPL28P46779 HMGB1P1-201ENST00000522557 636 ntBASIC1.79□□□□□ -2.12
RPL28P46779 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.79□□□□□ -2.12
RPL28P46779 OR5BN1P-201ENST00000532955 829 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AC022080.3-201ENST00000544433 482 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.79□□□□□ -2.12
RPL28P46779 AC090616.3-201ENST00000582184 217 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AC105224.1-201ENST00000587055 421 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.79□□□□□ -2.12
RPL28P46779 AL035413.2-201ENST00000604801 525 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AC008277.2-201ENST00000605196 797 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AC025588.4-201ENST00000615802 908 ntBASIC1.79□□□□□ -2.12
RPL28P46779 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RPL28P46779 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC1.79□□□□□ -2.12
RPL28P46779 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.79□□□□□ -2.12
RPL28P46779 AC079597.1-201ENST00000624306 508 ntBASIC1.79□□□□□ -2.12
RPL28P46779 AL512506.2-201ENST00000624472 458 ntBASIC1.79□□□□□ -2.12
RPL28P46779 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
RPL28P46779 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
RPL28P46779 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.79□□□□□ -2.12
RPL28P46779 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.79□□□□□ -2.12
RPL28P46779 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RPL28P46779 ZNF849P-201ENST00000594711 1566 ntBASIC1.78□□□□□ -2.12
RPL28P46779 OR4G11P-202ENST00000642116 1414 ntBASIC1.78□□□□□ -2.12
RPL28P46779 AL512283.1-201ENST00000606756 1384 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms