Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
RFC3P40938 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
RFC3P40938 AC092435.3-201ENST00000565538 3654 ntBASIC2.65□□□□□ -1.98
RFC3P40938 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.65□□□□□ -1.98
RFC3P40938 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.65□□□□□ -1.98
RFC3P40938 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RFC3P40938 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.65□□□□□ -1.99
RFC3P40938 SUGT1P1-201ENST00000379514 476 ntBASIC2.65□□□□□ -1.99
RFC3P40938 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
RFC3P40938 MIR493-201ENST00000385254 89 ntBASIC2.65□□□□□ -1.99
RFC3P40938 AL035405.1-201ENST00000400795 710 ntBASIC2.65□□□□□ -1.99
RFC3P40938 MIR1289-1-201ENST00000408836 144 ntBASIC2.65□□□□□ -1.99
RFC3P40938 RNU2-28P-201ENST00000410457 189 ntBASIC2.65□□□□□ -1.99
RFC3P40938 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.65□□□□□ -1.99
RFC3P40938 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.65□□□□□ -1.99
RFC3P40938 MTATP6P11-201ENST00000428071 670 ntBASIC2.65□□□□□ -1.99
RFC3P40938 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.65□□□□□ -1.99
RFC3P40938 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.65□□□□□ -1.99
RFC3P40938 COX6CP18-201ENST00000448769 222 ntBASIC2.65□□□□□ -1.99
RFC3P40938 RFC5P1-201ENST00000454419 874 ntBASIC2.65□□□□□ -1.99
RFC3P40938 AL359385.1-201ENST00000456509 365 ntBASIC2.65□□□□□ -1.99
RFC3P40938 RPS27AP9-201ENST00000477681 438 ntBASIC2.65□□□□□ -1.99
RFC3P40938 AP004217.1-201ENST00000480579 346 ntBASIC2.65□□□□□ -1.99
RFC3P40938 AC069306.1-201ENST00000507006 843 ntBASIC2.65□□□□□ -1.99
RFC3P40938 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.65□□□□□ -1.99
RFC3P40938 RNA5SP356-201ENST00000515972 94 ntBASIC2.65□□□□□ -1.99
RFC3P40938 RNU6-826P-201ENST00000516827 104 ntBASIC2.65□□□□□ -1.99
RFC3P40938 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.65□□□□□ -1.99
RFC3P40938 AC027309.2-201ENST00000520566 192 ntBASIC2.65□□□□□ -1.99
RFC3P40938 FAM60DP-201ENST00000524174 632 ntBASIC2.65□□□□□ -1.99
RFC3P40938 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.65□□□□□ -1.99
RFC3P40938 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.65□□□□□ -1.99
RFC3P40938 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.65□□□□□ -1.99
RFC3P40938 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
RFC3P40938 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RFC3P40938 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.65□□□□□ -1.99
RFC3P40938 AL022099.1-201ENST00000604551 712 ntBASIC2.65□□□□□ -1.99
RFC3P40938 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
RFC3P40938 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
RFC3P40938 AC011460.1-201ENST00000636268 1834 ntBASIC2.65□□□□□ -1.99
RFC3P40938 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.65□□□□□ -1.99
RFC3P40938 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.64□□□□□ -1.99
RFC3P40938 AC006378.2-201ENST00000623178 2476 ntBASIC2.64□□□□□ -1.99
RFC3P40938 CD24P4-201ENST00000382840 243 ntBASIC2.64□□□□□ -1.99
RFC3P40938 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RFC3P40938 RNA5SP274-201ENST00000410484 108 ntBASIC2.64□□□□□ -1.99
RFC3P40938 RPL19P1-201ENST00000411635 428 ntBASIC2.64□□□□□ -1.99
RFC3P40938 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.64□□□□□ -1.99
RFC3P40938 AL137014.1-201ENST00000420490 1226 ntBASIC2.64□□□□□ -1.99
RFC3P40938 MUPP-201ENST00000438111 566 ntBASIC2.64□□□□□ -1.99
RFC3P40938 AC105272.1-201ENST00000438604 198 ntBASIC2.64□□□□□ -1.99
RFC3P40938 AC093156.1-201ENST00000440382 670 ntBASIC2.64□□□□□ -1.99
RFC3P40938 RPS24P13-201ENST00000442520 397 ntBASIC2.64□□□□□ -1.99
RFC3P40938 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.64□□□□□ -1.99
RFC3P40938 AL162389.1-201ENST00000449233 177 ntBASIC2.64□□□□□ -1.99
RFC3P40938 MRPL42P4-201ENST00000453267 443 ntBASIC2.64□□□□□ -1.99
RFC3P40938 AC008571.1-201ENST00000467232 300 ntBASIC2.64□□□□□ -1.99
RFC3P40938 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RFC3P40938 DYNLL1P6-201ENST00000503440 264 ntBASIC2.64□□□□□ -1.99
RFC3P40938 HIGD1AP13-201ENST00000509878 289 ntBASIC2.64□□□□□ -1.99
RFC3P40938 RN7SKP43-201ENST00000516173 320 ntBASIC2.64□□□□□ -1.99
RFC3P40938 snoZ278.1-201ENST00000517059 112 ntBASIC2.64□□□□□ -1.99
RFC3P40938 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.64□□□□□ -1.99
RFC3P40938 SETP7-201ENST00000552169 453 ntBASIC2.64□□□□□ -1.99
RFC3P40938 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.64□□□□□ -1.99
RFC3P40938 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RFC3P40938 DNAJC8P1-201ENST00000554535 372 ntBASIC2.64□□□□□ -1.99
RFC3P40938 AC044913.1-201ENST00000557200 430 ntBASIC2.64□□□□□ -1.99
RFC3P40938 LARP7P2-201ENST00000575306 125 ntBASIC2.64□□□□□ -1.99
RFC3P40938 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.64□□□□□ -1.99
RFC3P40938 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.64□□□□□ -1.99
RFC3P40938 AC091057.2-201ENST00000602594 792 ntBASIC2.64□□□□□ -1.99
RFC3P40938 AC006023.1-201ENST00000603944 259 ntBASIC2.64□□□□□ -1.99
RFC3P40938 AC009039.2-201ENST00000624524 529 ntBASIC2.64□□□□□ -1.99
RFC3P40938 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.64□□□□□ -1.99
RFC3P40938 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RFC3P40938 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RFC3P40938 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
RFC3P40938 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RFC3P40938 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.63□□□□□ -1.99
RFC3P40938 GABRG2-229ENST00000641017 3628 ntBASIC2.63□□□□□ -1.99
RFC3P40938 RNU6-799P-201ENST00000363567 107 ntBASIC2.63□□□□□ -1.99
RFC3P40938 SNORA9.2-201ENST00000365361 133 ntBASIC2.63□□□□□ -1.99
RFC3P40938 UBE2V1P2-201ENST00000397758 440 ntBASIC2.63□□□□□ -1.99
RFC3P40938 RAP1BP1-201ENST00000412709 553 ntBASIC2.63□□□□□ -1.99
RFC3P40938 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.63□□□□□ -1.99
RFC3P40938 TMEM167AP1-201ENST00000423409 219 ntBASIC2.63□□□□□ -1.99
RFC3P40938 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.63□□□□□ -1.99
RFC3P40938 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.63□□□□□ -1.99
RFC3P40938 PSMA6P3-201ENST00000428242 164 ntBASIC2.63□□□□□ -1.99
RFC3P40938 EZH2P1-201ENST00000431167 291 ntBASIC2.63□□□□□ -1.99
RFC3P40938 AC092393.1-201ENST00000439625 742 ntBASIC2.63□□□□□ -1.99
RFC3P40938 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.63□□□□□ -1.99
RFC3P40938 USP9YP34-201ENST00000453983 808 ntBASIC2.63□□□□□ -1.99
RFC3P40938 AC004924.1-201ENST00000480160 781 ntBASIC2.63□□□□□ -1.99
RFC3P40938 AP001025.2-201ENST00000490908 477 ntBASIC2.63□□□□□ -1.99
RFC3P40938 AC026414.1-201ENST00000504046 698 ntBASIC2.63□□□□□ -1.99
RFC3P40938 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
RFC3P40938 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RFC3P40938 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms