Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC025755.1-201ENST00000521306 278 ntBASIC1.61□□□□□ -2.15
CKS2P33552 COX6CP8-201ENST00000522620 226 ntBASIC1.61□□□□□ -2.15
CKS2P33552 COX6CP5-201ENST00000527162 228 ntBASIC1.61□□□□□ -2.15
CKS2P33552 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.61□□□□□ -2.15
CKS2P33552 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.61□□□□□ -2.15
CKS2P33552 CCNG2P1-201ENST00000549521 1000 ntBASIC1.61□□□□□ -2.15
CKS2P33552 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.61□□□□□ -2.15
CKS2P33552 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.61□□□□□ -2.15
CKS2P33552 HMGB1P6-201ENST00000569046 646 ntBASIC1.61□□□□□ -2.15
CKS2P33552 RPS3AP23-202ENST00000574601 686 ntBASIC1.61□□□□□ -2.15
CKS2P33552 OR4K7P-201ENST00000580232 945 ntBASIC1.61□□□□□ -2.15
CKS2P33552 AC011471.1-201ENST00000585766 187 ntBASIC1.61□□□□□ -2.15
CKS2P33552 AC079089.3-201ENST00000603094 673 ntBASIC1.61□□□□□ -2.15
CKS2P33552 AL356280.1-201ENST00000603614 379 ntBASIC1.61□□□□□ -2.15
CKS2P33552 SNORD14A-201ENST00000606526 91 ntBASIC1.61□□□□□ -2.15
CKS2P33552 AC011374.2-201ENST00000607135 526 ntBASIC1.61□□□□□ -2.15
CKS2P33552 AC092954.1-201ENST00000609121 445 ntBASIC1.61□□□□□ -2.15
CKS2P33552 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.61□□□□□ -2.15
CKS2P33552 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.61□□□□□ -2.15
CKS2P33552 AC073968.1-201ENST00000618594 637 ntBASIC1.61□□□□□ -2.15
CKS2P33552 AL031601.2-202ENST00000622650 282 ntBASIC1.61□□□□□ -2.15
CKS2P33552 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CKS2P33552 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC1.61□□□□□ -2.15
CKS2P33552 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CKS2P33552 RNU1-85P-201ENST00000364127 164 ntBASIC1.6□□□□□ -2.15
CKS2P33552 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.6□□□□□ -2.15
CKS2P33552 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.6□□□□□ -2.15
CKS2P33552 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.6□□□□□ -2.15
CKS2P33552 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS2P33552 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.6□□□□□ -2.15
CKS2P33552 AC005005.2-201ENST00000420779 380 ntBASIC1.6□□□□□ -2.15
CKS2P33552 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS2P33552 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS2P33552 Z85994.2-201ENST00000434327 452 ntBASIC1.6□□□□□ -2.15
CKS2P33552 ARPC3P1-201ENST00000437218 533 ntBASIC1.6□□□□□ -2.15
CKS2P33552 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.6□□□□□ -2.15
CKS2P33552 IPO7P1-201ENST00000442031 636 ntBASIC1.6□□□□□ -2.15
CKS2P33552 RPL23AP7-203ENST00000449021 469 ntBASIC1.6□□□□□ -2.15
CKS2P33552 RSL24D1P3-201ENST00000449255 495 ntBASIC1.6□□□□□ -2.15
CKS2P33552 AC087588.1-201ENST00000462203 316 ntBASIC1.6□□□□□ -2.15
CKS2P33552 RPS27P21-201ENST00000486977 252 ntBASIC1.6□□□□□ -2.15
CKS2P33552 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CKS2P33552 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS2P33552 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS2P33552 MRPS36P2-201ENST00000512569 299 ntBASIC1.6□□□□□ -2.15
CKS2P33552 AC109329.2-201ENST00000519658 482 ntBASIC1.6□□□□□ -2.15
CKS2P33552 MTCYBP20-201ENST00000524239 1129 ntBASIC1.6□□□□□ -2.15
CKS2P33552 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS2P33552 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.6□□□□□ -2.15
CKS2P33552 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.6□□□□□ -2.15
CKS2P33552 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.6□□□□□ -2.15
CKS2P33552 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS2P33552 AC023824.2-201ENST00000566185 400 ntBASIC1.6□□□□□ -2.15
CKS2P33552 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS2P33552 MIR5007-201ENST00000583098 95 ntBASIC1.6□□□□□ -2.15
CKS2P33552 ELOCP29-201ENST00000588193 334 ntBASIC1.6□□□□□ -2.15
CKS2P33552 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS2P33552 AL020997.2-201ENST00000602607 184 ntBASIC1.6□□□□□ -2.15
CKS2P33552 MTCO3P22-201ENST00000603219 784 ntBASIC1.6□□□□□ -2.15
CKS2P33552 AC006023.1-201ENST00000603944 259 ntBASIC1.6□□□□□ -2.15
CKS2P33552 AP005137.2-201ENST00000609238 400 ntBASIC1.6□□□□□ -2.15
CKS2P33552 AC079395.3-201ENST00000615161 484 ntBASIC1.6□□□□□ -2.15
CKS2P33552 AC006133.1-201ENST00000617106 264 ntBASIC1.6□□□□□ -2.15
CKS2P33552 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.6□□□□□ -2.15
CKS2P33552 AC098657.3-201ENST00000620434 263 ntBASIC1.6□□□□□ -2.15
CKS2P33552 AC009831.4-201ENST00000620744 325 ntBASIC1.6□□□□□ -2.15
CKS2P33552 MIR6132-201ENST00000622083 109 ntBASIC1.6□□□□□ -2.15
CKS2P33552 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.6□□□□□ -2.15
CKS2P33552 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.6□□□□□ -2.15
CKS2P33552 MFSD8-245ENST00000641743 948 ntBASIC1.6□□□□□ -2.15
CKS2P33552 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.6□□□□□ -2.15
CKS2P33552 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
CKS2P33552 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.6□□□□□ -2.15
CKS2P33552 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.6□□□□□ -2.15
CKS2P33552 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CKS2P33552 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.6□□□□□ -2.15
CKS2P33552 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.59□□□□□ -2.15
CKS2P33552 FAM133CP-201ENST00000332869 704 ntBASIC1.59□□□□□ -2.15
CKS2P33552 RNU1-105P-201ENST00000363470 161 ntBASIC1.59□□□□□ -2.15
CKS2P33552 SNORA16B-201ENST00000364674 135 ntBASIC1.59□□□□□ -2.15
CKS2P33552 SNORA6-201ENST00000384033 151 ntBASIC1.59□□□□□ -2.15
CKS2P33552 SNORA44-201ENST00000384584 132 ntBASIC1.59□□□□□ -2.15
CKS2P33552 MIR134-201ENST00000385258 73 ntBASIC1.59□□□□□ -2.15
CKS2P33552 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CKS2P33552 RN7SKP27-201ENST00000410684 333 ntBASIC1.59□□□□□ -2.15
CKS2P33552 RNU2-40P-201ENST00000410833 196 ntBASIC1.59□□□□□ -2.15
CKS2P33552 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.59□□□□□ -2.15
CKS2P33552 AC008280.1-201ENST00000418851 412 ntBASIC1.59□□□□□ -2.15
CKS2P33552 AC234781.2-201ENST00000426370 994 ntBASIC1.59□□□□□ -2.15
CKS2P33552 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.59□□□□□ -2.15
CKS2P33552 YME1L1P1-201ENST00000429435 297 ntBASIC1.59□□□□□ -2.15
CKS2P33552 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.59□□□□□ -2.15
CKS2P33552 SDR42E1P3-201ENST00000438345 502 ntBASIC1.59□□□□□ -2.15
CKS2P33552 RAB11AP1-201ENST00000442978 646 ntBASIC1.59□□□□□ -2.15
CKS2P33552 MTCYBP3-201ENST00000445588 1137 ntBASIC1.59□□□□□ -2.15
CKS2P33552 AC004022.1-201ENST00000447766 1066 ntBASIC1.59□□□□□ -2.15
CKS2P33552 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
CKS2P33552 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.59□□□□□ -2.15
CKS2P33552 snoU13.28-201ENST00000459235 104 ntBASIC1.59□□□□□ -2.15
CKS2P33552 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms