Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.7□□□□□ -1.82
ABCD3P28288 MIR3146-201ENST00000580367 79 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 MIR548AB-201ENST00000584917 84 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 NBR2-204ENST00000587322 63 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 BNIP3P8-201ENST00000597863 560 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 AC110741.2-201ENST00000605278 268 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 RNU6-87P-201ENST00000607561 108 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 AC068831.8-201ENST00000620171 435 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ABCD3P28288 AP001148.1-201ENST00000624124 2359 ntBASIC3.7□□□□□ -1.82
ABCD3P28288 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ABCD3P28288 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ABCD3P28288 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
ABCD3P28288 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ABCD3P28288 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.69□□□□□ -1.82
ABCD3P28288 RNA5SP283-201ENST00000365604 119 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
ABCD3P28288 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ABCD3P28288 AC110754.1-201ENST00000399740 601 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 PPIAP31-201ENST00000405422 495 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AL591034.1-201ENST00000407447 340 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 RN7SKP56-201ENST00000410513 331 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 RNU2-62P-201ENST00000410868 191 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 RNA5SP306-201ENST00000411087 107 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AC018630.2-202ENST00000422992 927 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.69□□□□□ -1.82
ABCD3P28288 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.69□□□□□ -1.82
ABCD3P28288 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.69□□□□□ -1.82
ABCD3P28288 TBCAP1-201ENST00000436520 327 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 PDSS1P2-201ENST00000449397 678 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.69□□□□□ -1.82
ABCD3P28288 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.69□□□□□ -1.82
ABCD3P28288 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.69□□□□□ -1.82
ABCD3P28288 AC008481.1-201ENST00000463278 396 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AL049714.1-201ENST00000466686 347 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.69□□□□□ -1.82
ABCD3P28288 UBE2CP3-201ENST00000502715 450 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.69□□□□□ -1.82
ABCD3P28288 MTND5P13-201ENST00000513046 1079 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AC117532.1-201ENST00000514638 323 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AP003467.2-201ENST00000520175 319 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.69□□□□□ -1.82
ABCD3P28288 AC100870.1-201ENST00000522035 505 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
ABCD3P28288 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.69□□□□□ -1.82
ABCD3P28288 AC012414.6-201ENST00000568241 401 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 MIR3160-1-201ENST00000577972 85 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AF038458.1-201ENST00000588406 262 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.69□□□□□ -1.82
ABCD3P28288 AC067959.1-201ENST00000604334 379 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AC012603.1-201ENST00000606424 528 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AC135507.1-201ENST00000607214 561 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AP000254.1-201ENST00000609934 520 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 BX664608.1-201ENST00000610519 487 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.69□□□□□ -1.82
ABCD3P28288 AC245517.5-201ENST00000611529 162 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.69□□□□□ -1.82
ABCD3P28288 AL136164.4-201ENST00000625013 2135 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AL773545.4-201ENST00000637262 310 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 AL513478.4-201ENST00000641636 310 ntBASIC3.69□□□□□ -1.82
ABCD3P28288 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
ABCD3P28288 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
ABCD3P28288 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
ABCD3P28288 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
ABCD3P28288 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
ABCD3P28288 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.68□□□□□ -1.82
ABCD3P28288 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.68□□□□□ -1.82
ABCD3P28288 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
ABCD3P28288 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.68□□□□□ -1.82
ABCD3P28288 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.68□□□□□ -1.82
ABCD3P28288 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ABCD3P28288 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ABCD3P28288 RNA5SP322-201ENST00000363617 119 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 MIR1183-201ENST00000408856 89 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 RN7SKP159-201ENST00000410657 292 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 RNU6-628P-201ENST00000410675 107 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 RN7SKP263-201ENST00000411194 309 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 RN7SKP142-201ENST00000411236 328 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 HMGN1P14-201ENST00000412459 517 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 RPL21P24-201ENST00000413752 448 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.68□□□□□ -1.82
ABCD3P28288 AL590383.1-201ENST00000428602 75 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.68□□□□□ -1.82
ABCD3P28288 USP12PX-201ENST00000432383 1057 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.68□□□□□ -1.82
ABCD3P28288 MTND1P28-201ENST00000435623 950 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.68□□□□□ -1.82
ABCD3P28288 AC005094.1-201ENST00000440420 368 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 TAF9P1-201ENST00000445421 515 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 ANP32BP2-201ENST00000454525 545 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 TAF9P2-201ENST00000454958 515 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.68□□□□□ -1.82
ABCD3P28288 snoU109.1-201ENST00000459339 135 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.68□□□□□ -1.82
ABCD3P28288 AC020893.1-201ENST00000502452 580 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.68□□□□□ -1.82
ABCD3P28288 AC091965.2-201ENST00000512324 613 ntBASIC3.68□□□□□ -1.82
ABCD3P28288 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms