Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VARSP26640 LINC02555-201ENST00000563933 1951 ntBASIC5.83□□□□□ -1.48
VARSP26640 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VARSP26640 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VARSP26640 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
VARSP26640 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
VARSP26640 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VARSP26640 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VARSP26640 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VARSP26640 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VARSP26640 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.82□□□□□ -1.48
VARSP26640 BTBD10P1-201ENST00000549824 1352 ntBASIC5.82□□□□□ -1.48
VARSP26640 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VARSP26640 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
VARSP26640 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VARSP26640 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VARSP26640 Y_RNA.76-201ENST00000362931 109 ntBASIC5.82□□□□□ -1.48
VARSP26640 U8.8-201ENST00000365399 135 ntBASIC5.82□□□□□ -1.48
VARSP26640 RNA5SP284-201ENST00000384547 118 ntBASIC5.82□□□□□ -1.48
VARSP26640 MIR143-201ENST00000385300 106 ntBASIC5.82□□□□□ -1.48
VARSP26640 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VARSP26640 RNU2-21P-201ENST00000410368 188 ntBASIC5.82□□□□□ -1.48
VARSP26640 RNU2-51P-201ENST00000410708 197 ntBASIC5.82□□□□□ -1.48
VARSP26640 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.82□□□□□ -1.48
VARSP26640 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.82□□□□□ -1.48
VARSP26640 HMGN2P27-201ENST00000427352 270 ntBASIC5.82□□□□□ -1.48
VARSP26640 AL390119.1-201ENST00000440329 312 ntBASIC5.82□□□□□ -1.48
VARSP26640 AC016027.4-201ENST00000450866 277 ntBASIC5.82□□□□□ -1.48
VARSP26640 RPL23AP40-201ENST00000487630 390 ntBASIC5.82□□□□□ -1.48
VARSP26640 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.82□□□□□ -1.48
VARSP26640 FTH1P24-201ENST00000503502 462 ntBASIC5.82□□□□□ -1.48
VARSP26640 RPS4XP20-201ENST00000505751 772 ntBASIC5.82□□□□□ -1.48
VARSP26640 TOMM22P4-201ENST00000511318 336 ntBASIC5.82□□□□□ -1.48
VARSP26640 RN7SKP35-201ENST00000517210 151 ntBASIC5.82□□□□□ -1.48
VARSP26640 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.82□□□□□ -1.48
VARSP26640 CR383656.7-201ENST00000548164 174 ntBASIC5.82□□□□□ -1.48
VARSP26640 AL359219.2-201ENST00000555184 348 ntBASIC5.82□□□□□ -1.48
VARSP26640 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.82□□□□□ -1.48
VARSP26640 NF1P5-201ENST00000588287 448 ntBASIC5.82□□□□□ -1.48
VARSP26640 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.82□□□□□ -1.48
VARSP26640 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
VARSP26640 MIR6886-201ENST00000619864 61 ntBASIC5.82□□□□□ -1.48
VARSP26640 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.82□□□□□ -1.48
VARSP26640 AC144833.1-201ENST00000567953 4089 ntBASIC5.82□□□□□ -1.48
VARSP26640 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
VARSP26640 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VARSP26640 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VARSP26640 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.82□□□□□ -1.48
VARSP26640 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VARSP26640 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
VARSP26640 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
VARSP26640 RBMY1HP-201ENST00000382759 1389 ntBASIC5.81□□□□□ -1.48
VARSP26640 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARSP26640 Z95114.1-201ENST00000624264 14574 ntBASIC5.81□□□□□ -1.48
VARSP26640 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
VARSP26640 AC008758.3-201ENST00000507003 1829 ntBASIC5.81□□□□□ -1.48
VARSP26640 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARSP26640 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARSP26640 AC068870.1-201ENST00000563737 2455 ntBASIC5.81□□□□□ -1.48
VARSP26640 Y_RNA.143-201ENST00000363520 106 ntBASIC5.81□□□□□ -1.48
VARSP26640 RNU6-14P-201ENST00000384630 106 ntBASIC5.81□□□□□ -1.48
VARSP26640 RNU6-178P-201ENST00000384631 104 ntBASIC5.81□□□□□ -1.48
VARSP26640 AL109941.1-201ENST00000401925 229 ntBASIC5.81□□□□□ -1.48
VARSP26640 GNG5P5-201ENST00000420444 220 ntBASIC5.81□□□□□ -1.48
VARSP26640 RPL12P12-201ENST00000424633 501 ntBASIC5.81□□□□□ -1.48
VARSP26640 KRT8P51-201ENST00000438938 274 ntBASIC5.81□□□□□ -1.48
VARSP26640 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.81□□□□□ -1.48
VARSP26640 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.81□□□□□ -1.48
VARSP26640 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.81□□□□□ -1.48
VARSP26640 ACA64.4-201ENST00000459070 127 ntBASIC5.81□□□□□ -1.48
VARSP26640 PPIAP21-201ENST00000464473 501 ntBASIC5.81□□□□□ -1.48
VARSP26640 AC133134.1-201ENST00000466800 359 ntBASIC5.81□□□□□ -1.48
VARSP26640 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.81□□□□□ -1.48
VARSP26640 AC091021.1-201ENST00000468051 388 ntBASIC5.81□□□□□ -1.48
VARSP26640 AC007998.1-201ENST00000474156 672 ntBASIC5.81□□□□□ -1.48
VARSP26640 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.81□□□□□ -1.48
VARSP26640 RNA5SP228-201ENST00000516232 133 ntBASIC5.81□□□□□ -1.48
VARSP26640 FTH1P11-201ENST00000517577 551 ntBASIC5.81□□□□□ -1.48
VARSP26640 AC087369.1-201ENST00000520775 996 ntBASIC5.81□□□□□ -1.48
VARSP26640 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VARSP26640 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.81□□□□□ -1.48
VARSP26640 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.81□□□□□ -1.48
VARSP26640 AC127381.1-201ENST00000555979 939 ntBASIC5.81□□□□□ -1.48
VARSP26640 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
VARSP26640 AC119403.2-201ENST00000590960 598 ntBASIC5.81□□□□□ -1.48
VARSP26640 AL365265.1-201ENST00000621045 234 ntBASIC5.81□□□□□ -1.48
VARSP26640 AC138965.3-201ENST00000623875 498 ntBASIC5.81□□□□□ -1.48
VARSP26640 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARSP26640 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARSP26640 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.81□□□□□ -1.48
VARSP26640 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARSP26640 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.81□□□□□ -1.48
VARSP26640 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VARSP26640 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARSP26640 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
VARSP26640 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARSP26640 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARSP26640 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARSP26640 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VARSP26640 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms