Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC092354.2-201ENST00000607786 514 ntBASIC3.47□□□□□ -1.85
CDH3P22223 MIR7851-201ENST00000610611 160 ntBASIC3.47□□□□□ -1.85
CDH3P22223 AC122133.1-201ENST00000613964 233 ntBASIC3.47□□□□□ -1.85
CDH3P22223 AC084757.4-201ENST00000616350 526 ntBASIC3.47□□□□□ -1.85
CDH3P22223 AL357559.1-201ENST00000622228 274 ntBASIC3.47□□□□□ -1.85
CDH3P22223 AL732618.1-201ENST00000623251 301 ntBASIC3.47□□□□□ -1.85
CDH3P22223 AC009039.2-201ENST00000624524 529 ntBASIC3.47□□□□□ -1.85
CDH3P22223 AC099063.3-201ENST00000642066 185 ntBASIC3.47□□□□□ -1.85
CDH3P22223 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH3P22223 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.47□□□□□ -1.85
CDH3P22223 MTND5P27-201ENST00000428871 1720 ntBASIC3.47□□□□□ -1.85
CDH3P22223 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
CDH3P22223 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH3P22223 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDH3P22223 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH3P22223 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CDH3P22223 RNU6-289P-201ENST00000364093 107 ntBASIC3.46□□□□□ -1.86
CDH3P22223 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH3P22223 RNU6-629P-201ENST00000384061 103 ntBASIC3.46□□□□□ -1.86
CDH3P22223 RNA5SP293-201ENST00000410527 113 ntBASIC3.46□□□□□ -1.86
CDH3P22223 RNU6-55P-201ENST00000411092 107 ntBASIC3.46□□□□□ -1.86
CDH3P22223 RNU6-954P-201ENST00000411355 107 ntBASIC3.46□□□□□ -1.86
CDH3P22223 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH3P22223 AC083875.1-201ENST00000419509 405 ntBASIC3.46□□□□□ -1.86
CDH3P22223 AC019178.2-201ENST00000423595 505 ntBASIC3.46□□□□□ -1.86
CDH3P22223 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH3P22223 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH3P22223 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH3P22223 NDUFB1P1-201ENST00000435191 180 ntBASIC3.46□□□□□ -1.86
CDH3P22223 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH3P22223 RPL21P23-201ENST00000446654 460 ntBASIC3.46□□□□□ -1.86
CDH3P22223 MTCO1P27-201ENST00000448269 226 ntBASIC3.46□□□□□ -1.86
CDH3P22223 AC097262.1-201ENST00000452559 548 ntBASIC3.46□□□□□ -1.86
CDH3P22223 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH3P22223 PRSS3P4-201ENST00000453323 162 ntBASIC3.46□□□□□ -1.86
CDH3P22223 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH3P22223 AP001992.1-205ENST00000462248 379 ntBASIC3.46□□□□□ -1.86
CDH3P22223 RPL21P8-201ENST00000465083 535 ntBASIC3.46□□□□□ -1.86
CDH3P22223 RPL7P49-201ENST00000471402 708 ntBASIC3.46□□□□□ -1.86
CDH3P22223 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH3P22223 AC072039.1-201ENST00000477611 581 ntBASIC3.46□□□□□ -1.86
CDH3P22223 RPS3AP43-201ENST00000479743 781 ntBASIC3.46□□□□□ -1.86
CDH3P22223 AC093534.1-201ENST00000504977 132 ntBASIC3.46□□□□□ -1.86
CDH3P22223 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.46□□□□□ -1.86
CDH3P22223 MTND4LP22-201ENST00000508209 276 ntBASIC3.46□□□□□ -1.86
CDH3P22223 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.46□□□□□ -1.86
CDH3P22223 OR5AP1P-201ENST00000529730 940 ntBASIC3.46□□□□□ -1.86
CDH3P22223 EEF1B2P4-201ENST00000551398 348 ntBASIC3.46□□□□□ -1.86
CDH3P22223 AC007954.1-201ENST00000554198 494 ntBASIC3.46□□□□□ -1.86
CDH3P22223 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.46□□□□□ -1.86
CDH3P22223 MIR3922-201ENST00000585192 84 ntBASIC3.46□□□□□ -1.86
CDH3P22223 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH3P22223 AC006077.1-201ENST00000604746 343 ntBASIC3.46□□□□□ -1.86
CDH3P22223 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH3P22223 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.46□□□□□ -1.86
CDH3P22223 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.46□□□□□ -1.86
CDH3P22223 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CDH3P22223 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH3P22223 MTCO1P12-201ENST00000414273 1543 ntBASIC3.45□□□□□ -1.86
CDH3P22223 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
CDH3P22223 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH3P22223 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDH3P22223 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH3P22223 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH3P22223 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH3P22223 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH3P22223 SNORD51-201ENST00000384320 80 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AL583834.1-201ENST00000406943 343 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AC093578.1-201ENST00000415219 368 ntBASIC3.45□□□□□ -1.86
CDH3P22223 RPL23AP39-201ENST00000415533 405 ntBASIC3.45□□□□□ -1.86
CDH3P22223 MTATP6P27-201ENST00000416987 621 ntBASIC3.45□□□□□ -1.86
CDH3P22223 BX842559.1-201ENST00000419615 532 ntBASIC3.45□□□□□ -1.86
CDH3P22223 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH3P22223 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.45□□□□□ -1.86
CDH3P22223 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH3P22223 MTCO2P5-201ENST00000422621 426 ntBASIC3.45□□□□□ -1.86
CDH3P22223 BX679664.1-201ENST00000434429 253 ntBASIC3.45□□□□□ -1.86
CDH3P22223 SNRPEP7-201ENST00000438350 220 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH3P22223 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.45□□□□□ -1.86
CDH3P22223 CYCSP35-201ENST00000451978 304 ntBASIC3.45□□□□□ -1.86
CDH3P22223 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDH3P22223 AC010285.1-201ENST00000470580 392 ntBASIC3.45□□□□□ -1.86
CDH3P22223 HMGN2P13-201ENST00000476476 274 ntBASIC3.45□□□□□ -1.86
CDH3P22223 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH3P22223 HMGB1P36-201ENST00000487709 576 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AC023424.2-201ENST00000493479 777 ntBASIC3.45□□□□□ -1.86
CDH3P22223 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH3P22223 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH3P22223 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.45□□□□□ -1.86
CDH3P22223 AC093809.1-201ENST00000509155 340 ntBASIC3.45□□□□□ -1.86
CDH3P22223 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH3P22223 AC118465.1-201ENST00000513820 1271 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AC093677.1-201ENST00000514414 678 ntBASIC3.45□□□□□ -1.86
CDH3P22223 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.45□□□□□ -1.86
CDH3P22223 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.45□□□□□ -1.86
CDH3P22223 SNORA70.18-201ENST00000516696 98 ntBASIC3.45□□□□□ -1.86
CDH3P22223 MTCO1P47-201ENST00000523889 1271 ntBASIC3.45□□□□□ -1.86
CDH3P22223 AC008489.1-201ENST00000524271 483 ntBASIC3.45□□□□□ -1.86
CDH3P22223 OR6C7P-201ENST00000547875 934 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms