Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 RN7SKP32-201ENST00000410167 303 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 RNU2-17P-201ENST00000410290 190 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AL158825.1-201ENST00000414735 521 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC092447.3-201ENST00000426027 686 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 DEFB130D-201ENST00000426866 237 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.26□□□□□ -2.05
COL5A1P20908 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.26□□□□□ -2.05
COL5A1P20908 AC023512.1-201ENST00000444513 499 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AL606517.1-201ENST00000446914 387 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 HMGB1P38-201ENST00000490557 577 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 RPL23AP49-201ENST00000492925 468 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC134050.1-201ENST00000495088 933 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC025459.1-201ENST00000504072 156 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 RNA5SP281-201ENST00000516504 135 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.26□□□□□ -2.05
COL5A1P20908 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.26□□□□□ -2.05
COL5A1P20908 LRRC6P1-201ENST00000532188 885 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.26□□□□□ -2.05
COL5A1P20908 MTND1P24-201ENST00000552175 861 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 SNRPGP18-201ENST00000553000 214 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.26□□□□□ -2.05
COL5A1P20908 AC026464.5-201ENST00000562497 722 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 MIR5007-201ENST00000583098 95 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC093673.2-201ENST00000609674 331 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC073569.3-201ENST00000619055 682 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AP002782.1-201ENST00000623107 614 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC097520.1-201ENST00000624435 385 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC126544.2-201ENST00000625174 749 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.26□□□□□ -2.05
COL5A1P20908 AC084035.1-201ENST00000634543 607 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC006927.4-201ENST00000639187 543 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL5A1P20908 MIR6073-201ENST00000352083 89 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 RNU5B-4P-201ENST00000363508 111 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 DEFA7P-201ENST00000382676 285 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 MIR124-3-201ENST00000384866 87 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 RPL22P22-201ENST00000395439 379 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 MTCO2P8-201ENST00000412213 658 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.26□□□□□ -2.05
COL5A1P20908 RPS24P8-201ENST00000431490 402 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.26□□□□□ -2.05
COL5A1P20908 OR10R1P-201ENST00000441524 1141 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 OR51B8P-201ENST00000449892 769 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.26□□□□□ -2.05
COL5A1P20908 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL5A1P20908 SUMO2P5-201ENST00000506790 245 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.26□□□□□ -2.05
COL5A1P20908 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.26□□□□□ -2.05
COL5A1P20908 AC025281.1-201ENST00000567026 265 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.26□□□□□ -2.05
COL5A1P20908 FAM106CP-201ENST00000582212 507 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC061975.8-201ENST00000587058 721 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.26□□□□□ -2.05
COL5A1P20908 AP002802.2-201ENST00000605877 235 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.26□□□□□ -2.05
COL5A1P20908 AC004943.3-201ENST00000624116 600 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 AC097655.1-201ENST00000635075 318 ntBASIC2.26□□□□□ -2.05
COL5A1P20908 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL5A1P20908 GABPAP-201ENST00000419271 1356 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 API5P2-201ENST00000397055 1498 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 AC114546.3-201ENST00000623582 1734 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COL5A1P20908 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.25□□□□□ -2.05
COL5A1P20908 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.25□□□□□ -2.05
COL5A1P20908 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.25□□□□□ -2.05
COL5A1P20908 METTL21EP-201ENST00000298105 713 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL5A1P20908 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COL5A1P20908 RNU6-207P-201ENST00000384137 107 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 SNORA17.3-201ENST00000391159 129 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 TATDN1P1-201ENST00000414123 891 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 AC092634.2-201ENST00000428146 1010 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 NANOGP2-201ENST00000435391 727 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.25□□□□□ -2.05
COL5A1P20908 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COL5A1P20908 CACYBPP1-201ENST00000438592 684 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 MTND1P26-201ENST00000440488 538 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 ELOCP13-201ENST00000443934 329 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 AL353898.1-201ENST00000444055 238 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 RPS27P5-201ENST00000444247 244 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 AP001086.1-201ENST00000494882 321 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 AC087894.1-201ENST00000538359 518 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.25□□□□□ -2.05
COL5A1P20908 MIR4789-201ENST00000577469 82 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 MIR4716-201ENST00000579628 84 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.25□□□□□ -2.05
COL5A1P20908 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.25□□□□□ -2.05
COL5A1P20908 AC022022.2-201ENST00000602989 360 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 MIR6845-201ENST00000613182 61 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 RMST_10.1-201ENST00000616309 154 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 MIR6766-201ENST00000622641 72 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.25□□□□□ -2.05
COL5A1P20908 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.25□□□□□ -2.05
COL5A1P20908 SNORA50A-202ENST00000629536 136 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 AC083865.1-201ENST00000636634 831 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COL5A1P20908 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COL5A1P20908 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.25□□□□□ -2.05
COL5A1P20908 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
COL5A1P20908 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms