Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC109809.1-201ENST00000619665 545 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 AC009269.6-201ENST00000621778 588 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 AC093908.1-201ENST00000623125 8092 ntBASIC3.3□□□□□ -1.88
HLA-DPA1P20036 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DPA1P20036 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 MIR208A-201ENST00000362287 71 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 Y_RNA.311-201ENST00000365068 96 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 SNORA70.4-201ENST00000365509 134 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 MIR122-201ENST00000385044 85 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 ERHP2-201ENST00000402323 299 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AL158156.1-201ENST00000422509 473 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 RPL31P12-201ENST00000422587 358 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AC018630.2-202ENST00000422992 927 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 LSM1P1-201ENST00000438629 273 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AC009237.8-201ENST00000445492 379 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AC104978.1-201ENST00000449387 391 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 ZNF886P-201ENST00000450781 723 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 FCF1P6-201ENST00000456841 595 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 snoU13.22-201ENST00000459428 104 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AC091179.1-201ENST00000461606 579 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AC091153.1-201ENST00000466297 402 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AL049874.1-201ENST00000489560 388 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AC110794.1-201ENST00000505816 425 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 HIGD1AP1-201ENST00000550979 275 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 CYCSP2-201ENST00000558168 301 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 ACTR3BP3-201ENST00000565577 979 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AC004832.5-201ENST00000608677 401 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AC131235.4-201ENST00000609288 620 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AC090132.2-201ENST00000615881 347 ntBASIC3.29□□□□□ -1.88
HLA-DPA1P20036 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.29□□□□□ -1.88
HLA-DPA1P20036 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AC091564.4-201ENST00000533934 2194 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AL161781.1-201ENST00000354277 403 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 RNU6-97P-201ENST00000363387 104 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 RNA5SP267-201ENST00000364893 126 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 RPL23AP29-201ENST00000397284 453 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 MIR1284-201ENST00000408337 120 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 PPP1R11P2-201ENST00000423543 382 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AL590383.1-201ENST00000428602 75 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 ATP5F1P1-201ENST00000433775 569 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 MTND5P14-201ENST00000441481 1267 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 HMGB3P8-201ENST00000449709 577 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 MTND2P24-201ENST00000453434 806 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 SNORD121B-201ENST00000458838 81 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 RPS29P12-201ENST00000460178 152 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 RPL30P9-201ENST00000465586 330 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AL358832.1-201ENST00000497800 389 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AC021678.1-201ENST00000505195 936 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 HSPD1P15-201ENST00000505573 1122 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 TXNP6-201ENST00000510190 310 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AC079395.1-201ENST00000510981 262 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AC109445.1-201ENST00000512356 383 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 COX6CP8-201ENST00000522620 226 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AC008507.1-201ENST00000587506 734 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AL162713.1-201ENST00000604480 262 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AC012468.1-201ENST00000604888 430 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 AC007179.3-201ENST00000604976 235 ntBASIC3.28□□□□□ -1.88
HLA-DPA1P20036 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms