Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
ERCC3P19447 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
ERCC3P19447 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ERCC3P19447 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
ERCC3P19447 SNORA70.2-201ENST00000364506 135 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 RNU6-61P-201ENST00000365528 109 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 SMIM11P1-201ENST00000369586 178 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 RNU6-767P-201ENST00000384132 107 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 Y_RNA.576-201ENST00000384781 102 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 UBE2V1P2-201ENST00000397758 440 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 RNA5SP111-201ENST00000411386 101 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.55□□□□□ -1.52
ERCC3P19447 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC3P19447 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC3P19447 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC3P19447 NEFMP1-201ENST00000443423 1006 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC3P19447 AL031584.1-201ENST00000447169 754 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 GAPDHP27-201ENST00000447427 1020 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC3P19447 MTND1P11-201ENST00000456661 876 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 AC079804.1-201ENST00000461922 436 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 RPL23AP2-201ENST00000471227 466 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 RPL21P99-201ENST00000480369 423 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.55□□□□□ -1.52
ERCC3P19447 AC068587.1-201ENST00000483613 781 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 RPL39P36-201ENST00000490784 156 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC3P19447 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.55□□□□□ -1.52
ERCC3P19447 BTF3P12-201ENST00000519620 469 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 AC022690.1-201ENST00000526681 550 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC3P19447 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.55□□□□□ -1.52
ERCC3P19447 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC3P19447 MIR4277-201ENST00000578298 84 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 DPPA3P3-201ENST00000603842 430 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 AL353748.2-201ENST00000622148 471 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC3P19447 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
ERCC3P19447 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.55□□□□□ -1.52
ERCC3P19447 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ERCC3P19447 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ERCC3P19447 AC139713.2-214ENST00000642059 1811 ntBASIC5.55□□□□□ -1.52
ERCC3P19447 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ERCC3P19447 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ERCC3P19447 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.54□□□□□ -1.52
ERCC3P19447 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ERCC3P19447 AL672167.1-204ENST00000641875 3017 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 RNU5A-1-201ENST00000362698 116 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 SNORA73.1-201ENST00000363107 205 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 SNORD113.2-201ENST00000364166 89 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 Y_RNA.279-201ENST00000364763 95 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 SNORD115-7-201ENST00000365306 82 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 Y_RNA.356-201ENST00000365475 113 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.54□□□□□ -1.52
ERCC3P19447 RPL36AP6-201ENST00000435770 321 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.54□□□□□ -1.52
ERCC3P19447 ARL2BPP10-201ENST00000446487 531 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 AC073587.1-201ENST00000447093 876 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.54□□□□□ -1.52
ERCC3P19447 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.54□□□□□ -1.52
ERCC3P19447 RANP3-201ENST00000530970 276 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.54□□□□□ -1.52
ERCC3P19447 AL110118.1-201ENST00000553543 400 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 PARP1P2-201ENST00000556806 195 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 AC024619.4-201ENST00000580924 316 ntBASIC5.54□□□□□ -1.52
ERCC3P19447 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.54□□□□□ -1.52
ERCC3P19447 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.54□□□□□ -1.52
ERCC3P19447 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.54□□□□□ -1.52
ERCC3P19447 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.54□□□□□ -1.52
ERCC3P19447 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
ERCC3P19447 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.53□□□□□ -1.52
ERCC3P19447 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ERCC3P19447 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.53□□□□□ -1.52
ERCC3P19447 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.53□□□□□ -1.52
ERCC3P19447 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 RPL30P2-201ENST00000414021 291 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 AL161631.1-201ENST00000417933 486 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 RPL35AP12-201ENST00000425362 338 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.53□□□□□ -1.52
ERCC3P19447 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.53□□□□□ -1.52
ERCC3P19447 AL118520.1-201ENST00000450770 291 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 ELOCP23-201ENST00000452014 332 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 AC103987.1-201ENST00000473394 348 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.53□□□□□ -1.52
ERCC3P19447 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.53□□□□□ -1.52
ERCC3P19447 MTCO1P35-201ENST00000515270 228 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 NARSP2-201ENST00000518524 679 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 AC023050.3-201ENST00000541142 333 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 BNIP3P6-201ENST00000549284 499 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 ATP5J2P6-201ENST00000565203 266 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 AC136624.4-201ENST00000573044 370 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 AC006116.10-201ENST00000591836 581 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 AC005255.1-201ENST00000593748 216 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.53□□□□□ -1.52
ERCC3P19447 AC068831.8-201ENST00000620171 435 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 AC022140.2-201ENST00000623500 188 ntBASIC5.53□□□□□ -1.52
ERCC3P19447 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.53□□□□□ -1.52
ERCC3P19447 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms