Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL133393.1-201ENST00000603277 287 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 AC100793.4-201ENST00000613683 429 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 AL355810.1-201ENST00000614629 552 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 AC025588.4-201ENST00000615802 908 ntBASIC3.05□□□□□ -1.92
XRCC1P18887 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.05□□□□□ -1.92
XRCC1P18887 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.05□□□□□ -1.92
XRCC1P18887 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.05□□□□□ -1.92
XRCC1P18887 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
XRCC1P18887 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
XRCC1P18887 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
XRCC1P18887 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.04□□□□□ -1.92
XRCC1P18887 AL390862.1-201ENST00000635467 1469 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 AC099786.3-201ENST00000565735 1410 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
XRCC1P18887 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
XRCC1P18887 RN7SKP220-201ENST00000410611 288 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 RNU4-22P-201ENST00000411058 166 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 AC096664.2-201ENST00000411843 406 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 MTATP6P27-201ENST00000416987 621 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 RPL7P30-201ENST00000420888 709 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 MUPP-201ENST00000438111 566 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 TRIM60P18-201ENST00000441518 828 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 GAPDHP27-201ENST00000447427 1020 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.04□□□□□ -1.92
XRCC1P18887 RPL18AP17-201ENST00000455326 198 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.04□□□□□ -1.92
XRCC1P18887 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.04□□□□□ -1.92
XRCC1P18887 AC108860.1-201ENST00000484521 383 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
XRCC1P18887 KLHL2P1-201ENST00000508691 521 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.04□□□□□ -1.92
XRCC1P18887 AC008885.1-201ENST00000514930 301 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 RNA5SP341-201ENST00000516261 117 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
XRCC1P18887 AC022861.1-201ENST00000522981 663 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.04□□□□□ -1.92
XRCC1P18887 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.04□□□□□ -1.92
XRCC1P18887 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.04□□□□□ -1.92
XRCC1P18887 AC055876.1-202ENST00000567053 138 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 OR4K7P-201ENST00000580232 945 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 AP001269.3-201ENST00000588718 329 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 AC006539.2-201ENST00000601729 572 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 BNIP3P11-201ENST00000603878 563 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 PRELID3BP8-201ENST00000604148 295 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 AC144521.1-201ENST00000607148 956 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 AL157392.4-201ENST00000609756 345 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 AL162274.2-201ENST00000614406 332 ntBASIC3.04□□□□□ -1.92
XRCC1P18887 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.04□□□□□ -1.92
XRCC1P18887 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.04□□□□□ -1.92
XRCC1P18887 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.04□□□□□ -1.92
XRCC1P18887 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.04□□□□□ -1.92
XRCC1P18887 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.04□□□□□ -1.92
XRCC1P18887 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.04□□□□□ -1.92
XRCC1P18887 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.04□□□□□ -1.92
XRCC1P18887 AP002907.1-201ENST00000606361 1430 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
XRCC1P18887 RNU4-92P-201ENST00000363783 136 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 RPL17P50-201ENST00000396131 546 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AL138885.1-201ENST00000405921 675 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 RN7SKP123-201ENST00000410732 291 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 RN7SKP58-201ENST00000411010 305 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 MTCO2P8-201ENST00000412213 658 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.03□□□□□ -1.92
XRCC1P18887 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AL137014.1-201ENST00000420490 1226 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 MTCO2P5-201ENST00000422621 426 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AL590233.1-201ENST00000430017 456 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.03□□□□□ -1.92
XRCC1P18887 AC108734.1-201ENST00000439549 399 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AC004854.1-201ENST00000440356 349 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.03□□□□□ -1.92
XRCC1P18887 DUXAP8-207ENST00000456786 622 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AC005410.1-202ENST00000460347 485 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AC011825.1-201ENST00000484967 388 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
XRCC1P18887 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.03□□□□□ -1.92
XRCC1P18887 AC134050.1-201ENST00000495088 933 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 TMEM251P1-201ENST00000503717 318 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AC105914.1-201ENST00000511798 226 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AC109445.1-201ENST00000512356 383 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 SNORA31.8-201ENST00000516327 108 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.03□□□□□ -1.92
XRCC1P18887 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.03□□□□□ -1.92
XRCC1P18887 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.03□□□□□ -1.92
XRCC1P18887 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.03□□□□□ -1.92
XRCC1P18887 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.03□□□□□ -1.92
XRCC1P18887 MAGOH2P-202ENST00000584384 429 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AP001029.3-201ENST00000588063 596 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 BNIP3P39-201ENST00000601077 554 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 RNU4-5P-201ENST00000607255 135 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 DUXAP10-204ENST00000612052 616 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AC135507.2-201ENST00000612443 309 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AL391262.2-201ENST00000622466 494 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 AC084035.1-201ENST00000634543 607 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 SGO1P2-201ENST00000429458 1589 ntBASIC3.03□□□□□ -1.92
XRCC1P18887 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
XRCC1P18887 OR4G11P-202ENST00000642116 1414 ntBASIC3.02□□□□□ -1.93
XRCC1P18887 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms