Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.5□□□□□ -1.53
LIG1P18858 AC011487.3-201ENST00000593607 453 ntBASIC5.5□□□□□ -1.53
LIG1P18858 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.5□□□□□ -1.53
LIG1P18858 AC245389.1-201ENST00000605141 529 ntBASIC5.5□□□□□ -1.53
LIG1P18858 SNORD91B-202ENST00000608459 222 ntBASIC5.5□□□□□ -1.53
LIG1P18858 AC103710.2-201ENST00000609912 942 ntBASIC5.5□□□□□ -1.53
LIG1P18858 AC245517.5-201ENST00000611529 162 ntBASIC5.5□□□□□ -1.53
LIG1P18858 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LIG1P18858 AC100827.5-201ENST00000615883 426 ntBASIC5.5□□□□□ -1.53
LIG1P18858 uc_338.22-201ENST00000622722 187 ntBASIC5.5□□□□□ -1.53
LIG1P18858 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
LIG1P18858 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.5□□□□□ -1.53
LIG1P18858 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
LIG1P18858 AC107068.1-201ENST00000563286 4218 ntBASIC5.5□□□□□ -1.53
LIG1P18858 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.5□□□□□ -1.53
LIG1P18858 AL592148.3-201ENST00000608771 2646 ntBASIC5.49□□□□□ -1.53
LIG1P18858 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LIG1P18858 AP001350.1-201ENST00000601906 1524 ntBASIC5.49□□□□□ -1.53
LIG1P18858 AL139811.1-201ENST00000424779 2299 ntBASIC5.49□□□□□ -1.53
LIG1P18858 RNU5A-8P-201ENST00000364102 114 ntBASIC5.49□□□□□ -1.53
LIG1P18858 U3.11-201ENST00000364476 212 ntBASIC5.49□□□□□ -1.53
LIG1P18858 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.49□□□□□ -1.53
LIG1P18858 RNU6-196P-201ENST00000384315 107 ntBASIC5.49□□□□□ -1.53
LIG1P18858 AL356057.3-201ENST00000402607 340 ntBASIC5.49□□□□□ -1.53
LIG1P18858 AL606923.1-201ENST00000406616 190 ntBASIC5.49□□□□□ -1.53
LIG1P18858 MIR548K-201ENST00000408406 116 ntBASIC5.49□□□□□ -1.53
LIG1P18858 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LIG1P18858 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.49□□□□□ -1.53
LIG1P18858 AC234779.1-201ENST00000425910 285 ntBASIC5.49□□□□□ -1.53
LIG1P18858 PSMA6P3-201ENST00000428242 164 ntBASIC5.49□□□□□ -1.53
LIG1P18858 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.49□□□□□ -1.53
LIG1P18858 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.49□□□□□ -1.53
LIG1P18858 CEACAMP1-201ENST00000434624 1035 ntBASIC5.49□□□□□ -1.53
LIG1P18858 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.49□□□□□ -1.53
LIG1P18858 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.49□□□□□ -1.53
LIG1P18858 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
LIG1P18858 AC083982.1-201ENST00000485679 344 ntBASIC5.49□□□□□ -1.53
LIG1P18858 RPL30P11-201ENST00000495304 339 ntBASIC5.49□□□□□ -1.53
LIG1P18858 AC083829.1-201ENST00000503756 657 ntBASIC5.49□□□□□ -1.53
LIG1P18858 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.49□□□□□ -1.53
LIG1P18858 AC093767.1-201ENST00000504523 156 ntBASIC5.49□□□□□ -1.53
LIG1P18858 Y_RNA.719-201ENST00000517156 106 ntBASIC5.49□□□□□ -1.53
LIG1P18858 Y_RNA.720-201ENST00000517166 92 ntBASIC5.49□□□□□ -1.53
LIG1P18858 AC134698.5-201ENST00000519444 336 ntBASIC5.49□□□□□ -1.53
LIG1P18858 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.49□□□□□ -1.53
LIG1P18858 AP001804.3-201ENST00000525146 880 ntBASIC5.49□□□□□ -1.53
LIG1P18858 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LIG1P18858 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LIG1P18858 AC103843.2-201ENST00000530523 682 ntBASIC5.49□□□□□ -1.53
LIG1P18858 OR4P1P-201ENST00000530808 1136 ntBASIC5.49□□□□□ -1.53
LIG1P18858 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.49□□□□□ -1.53
LIG1P18858 AC244100.1-202ENST00000621554 382 ntBASIC5.49□□□□□ -1.53
LIG1P18858 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LIG1P18858 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
LIG1P18858 AC066616.2-201ENST00000559334 1481 ntBASIC5.49□□□□□ -1.53
LIG1P18858 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LIG1P18858 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
LIG1P18858 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
LIG1P18858 AL359922.3-201ENST00000624779 1670 ntBASIC5.49□□□□□ -1.53
LIG1P18858 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LIG1P18858 AL356489.2-201ENST00000566968 3528 ntBASIC5.49□□□□□ -1.53
LIG1P18858 DHX40P1-201ENST00000588725 1412 ntBASIC5.48□□□□□ -1.53
LIG1P18858 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIG1P18858 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
LIG1P18858 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIG1P18858 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIG1P18858 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LIG1P18858 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIG1P18858 Y_RNA.31-201ENST00000362574 102 ntBASIC5.48□□□□□ -1.53
LIG1P18858 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIG1P18858 RNU6-1226P-201ENST00000384317 107 ntBASIC5.48□□□□□ -1.53
LIG1P18858 COX6B1P1-201ENST00000415962 213 ntBASIC5.48□□□□□ -1.53
LIG1P18858 AC113618.1-201ENST00000416747 285 ntBASIC5.48□□□□□ -1.53
LIG1P18858 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.48□□□□□ -1.53
LIG1P18858 AL645608.4-201ENST00000423619 154 ntBASIC5.48□□□□□ -1.53
LIG1P18858 COX6CP15-201ENST00000426313 211 ntBASIC5.48□□□□□ -1.53
LIG1P18858 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.48□□□□□ -1.53
LIG1P18858 AC104308.1-201ENST00000454621 333 ntBASIC5.48□□□□□ -1.53
LIG1P18858 RPS3AP41-201ENST00000462701 778 ntBASIC5.48□□□□□ -1.53
LIG1P18858 PLGLA-201ENST00000465668 449 ntBASIC5.48□□□□□ -1.53
LIG1P18858 DEFB109F-201ENST00000491870 277 ntBASIC5.48□□□□□ -1.53
LIG1P18858 AC093303.1-201ENST00000514549 295 ntBASIC5.48□□□□□ -1.53
LIG1P18858 Y_RNA.682-201ENST00000516457 100 ntBASIC5.48□□□□□ -1.53
LIG1P18858 COPS8P3-201ENST00000526024 482 ntBASIC5.48□□□□□ -1.53
LIG1P18858 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.48□□□□□ -1.53
LIG1P18858 APOOP3-201ENST00000536787 586 ntBASIC5.48□□□□□ -1.53
LIG1P18858 AC063950.1-201ENST00000552036 308 ntBASIC5.48□□□□□ -1.53
LIG1P18858 SNORA74C-1-201ENST00000580726 201 ntBASIC5.48□□□□□ -1.53
LIG1P18858 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.48□□□□□ -1.53
LIG1P18858 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.48□□□□□ -1.53
LIG1P18858 AL031320.1-201ENST00000604177 357 ntBASIC5.48□□□□□ -1.53
LIG1P18858 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.48□□□□□ -1.53
LIG1P18858 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIG1P18858 AC007546.1-201ENST00000619452 559 ntBASIC5.48□□□□□ -1.53
LIG1P18858 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.48□□□□□ -1.53
LIG1P18858 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
LIG1P18858 SAGE2P-201ENST00000420011 2126 ntBASIC5.48□□□□□ -1.53
LIG1P18858 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LIG1P18858 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.48□□□□□ -1.53
LIG1P18858 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms