Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 TRIAP1P1-201ENST00000427062 225 ntBASIC2.88□□□□□ -1.95
CFTRP13569 MTCO3P21-201ENST00000430791 643 ntBASIC2.88□□□□□ -1.95
CFTRP13569 VN1R96P-201ENST00000446052 858 ntBASIC2.88□□□□□ -1.95
CFTRP13569 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.88□□□□□ -1.95
CFTRP13569 RN7SKP40-201ENST00000517211 242 ntBASIC2.88□□□□□ -1.95
CFTRP13569 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.88□□□□□ -1.95
CFTRP13569 MIR4512-201ENST00000583257 77 ntBASIC2.88□□□□□ -1.95
CFTRP13569 VN1R84P-201ENST00000593697 235 ntBASIC2.88□□□□□ -1.95
CFTRP13569 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CFTRP13569 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.88□□□□□ -1.95
CFTRP13569 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.88□□□□□ -1.95
CFTRP13569 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CFTRP13569 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CFTRP13569 AL121972.1-201ENST00000402023 252 ntBASIC2.87□□□□□ -1.95
CFTRP13569 SNRPFP4-201ENST00000456366 242 ntBASIC2.87□□□□□ -1.95
CFTRP13569 AMD1P1-201ENST00000457220 922 ntBASIC2.87□□□□□ -1.95
CFTRP13569 RNU1-123P-201ENST00000458950 160 ntBASIC2.87□□□□□ -1.95
CFTRP13569 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.87□□□□□ -1.95
CFTRP13569 HMGB1P47-201ENST00000511281 589 ntBASIC2.87□□□□□ -1.95
CFTRP13569 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.87□□□□□ -1.95
CFTRP13569 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.87□□□□□ -1.95
CFTRP13569 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.87□□□□□ -1.95
CFTRP13569 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.87□□□□□ -1.95
CFTRP13569 AC098848.2-201ENST00000588023 330 ntBASIC2.87□□□□□ -1.95
CFTRP13569 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.87□□□□□ -1.95
CFTRP13569 AC004943.3-201ENST00000624116 600 ntBASIC2.87□□□□□ -1.95
CFTRP13569 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
CFTRP13569 AC233981.2-201ENST00000611524 1614 ntBASIC2.87□□□□□ -1.95
CFTRP13569 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
CFTRP13569 CKAP2P1-201ENST00000555477 2049 ntBASIC2.87□□□□□ -1.95
CFTRP13569 AC005336.3-201ENST00000623833 2679 ntBASIC2.86□□□□□ -1.95
CFTRP13569 AF127577.6-201ENST00000623352 2191 ntBASIC2.86□□□□□ -1.95
CFTRP13569 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CFTRP13569 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CFTRP13569 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CFTRP13569 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CFTRP13569 MIR1323-201ENST00000408090 73 ntBASIC2.86□□□□□ -1.95
CFTRP13569 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.86□□□□□ -1.95
CFTRP13569 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.86□□□□□ -1.95
CFTRP13569 ISCA1P3-201ENST00000577104 373 ntBASIC2.86□□□□□ -1.95
CFTRP13569 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CFTRP13569 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CFTRP13569 AL355578.1-201ENST00000607405 1328 ntBASIC2.85□□□□□ -1.95
CFTRP13569 RNU6-60P-201ENST00000364792 103 ntBASIC2.85□□□□□ -1.95
CFTRP13569 RNA5SP37-201ENST00000365420 130 ntBASIC2.85□□□□□ -1.95
CFTRP13569 AL590084.1-201ENST00000407885 387 ntBASIC2.85□□□□□ -1.95
CFTRP13569 RPL19P1-201ENST00000411635 428 ntBASIC2.85□□□□□ -1.95
CFTRP13569 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.85□□□□□ -1.95
CFTRP13569 AC073464.3-201ENST00000422564 712 ntBASIC2.85□□□□□ -1.95
CFTRP13569 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.85□□□□□ -1.95
CFTRP13569 RPL7P37-201ENST00000425095 738 ntBASIC2.85□□□□□ -1.95
CFTRP13569 FO393414.1-201ENST00000428697 1184 ntBASIC2.85□□□□□ -1.95
CFTRP13569 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.85□□□□□ -1.95
CFTRP13569 AC012170.1-201ENST00000495139 359 ntBASIC2.85□□□□□ -1.95
CFTRP13569 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.85□□□□□ -1.95
CFTRP13569 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.85□□□□□ -1.95
CFTRP13569 AC124283.4-201ENST00000581815 456 ntBASIC2.85□□□□□ -1.95
CFTRP13569 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.85□□□□□ -1.95
CFTRP13569 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.85□□□□□ -1.95
CFTRP13569 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CFTRP13569 AC000367.1-201ENST00000452711 1766 ntBASIC2.85□□□□□ -1.95
CFTRP13569 AP001148.1-201ENST00000624124 2359 ntBASIC2.85□□□□□ -1.95
CFTRP13569 MIR124-3-201ENST00000384866 87 ntBASIC2.84□□□□□ -1.95
CFTRP13569 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.84□□□□□ -1.95
CFTRP13569 AC104581.2-201ENST00000572227 430 ntBASIC2.84□□□□□ -1.95
CFTRP13569 MIR4421-201ENST00000578133 69 ntBASIC2.84□□□□□ -1.95
CFTRP13569 AC013444.2-201ENST00000603317 787 ntBASIC2.84□□□□□ -1.95
CFTRP13569 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CFTRP13569 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CFTRP13569 AC012321.1-201ENST00000561622 1588 ntBASIC2.84□□□□□ -1.95
CFTRP13569 ZNF876P-202ENST00000398732 1485 ntBASIC2.84□□□□□ -1.95
CFTRP13569 AL512283.1-201ENST00000606756 1384 ntBASIC2.84□□□□□ -1.96
CFTRP13569 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CFTRP13569 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CFTRP13569 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.84□□□□□ -1.96
CFTRP13569 TRIM60P18-201ENST00000441518 828 ntBASIC2.84□□□□□ -1.96
CFTRP13569 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.84□□□□□ -1.96
CFTRP13569 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.84□□□□□ -1.96
CFTRP13569 AC069528.1-202ENST00000482888 637 ntBASIC2.84□□□□□ -1.96
CFTRP13569 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.84□□□□□ -1.96
CFTRP13569 RMST_6.1-201ENST00000611980 203 ntBASIC2.84□□□□□ -1.96
CFTRP13569 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.84□□□□□ -1.96
CFTRP13569 RMST_2.1-201ENST00000617263 136 ntBASIC2.84□□□□□ -1.96
CFTRP13569 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
CFTRP13569 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.83□□□□□ -1.96
CFTRP13569 RNU6-53P-201ENST00000365367 106 ntBASIC2.83□□□□□ -1.96
CFTRP13569 TAS2R15P-201ENST00000390674 928 ntBASIC2.83□□□□□ -1.96
CFTRP13569 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.83□□□□□ -1.96
CFTRP13569 AC089999.1-201ENST00000460336 374 ntBASIC2.83□□□□□ -1.96
CFTRP13569 RNA5SP102-201ENST00000516865 106 ntBASIC2.83□□□□□ -1.96
CFTRP13569 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.83□□□□□ -1.96
CFTRP13569 AC068714.1-201ENST00000559623 800 ntBASIC2.83□□□□□ -1.96
CFTRP13569 AC091488.1-201ENST00000604239 660 ntBASIC2.83□□□□□ -1.96
CFTRP13569 MIR6895-201ENST00000613497 78 ntBASIC2.83□□□□□ -1.96
CFTRP13569 AC106730.3-201ENST00000624568 641 ntBASIC2.83□□□□□ -1.96
CFTRP13569 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CFTRP13569 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CFTRP13569 SNORA26.7-201ENST00000391288 122 ntBASIC2.82□□□□□ -1.96
CFTRP13569 AL035405.1-201ENST00000400795 710 ntBASIC2.82□□□□□ -1.96
CFTRP13569 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms