Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CXCL1P09341 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
CXCL1P09341 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.79□□□□□ -2.12
CXCL1P09341 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 RNU1-52P-201ENST00000384190 164 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CXCL1P09341 RNA5SP354-201ENST00000391247 136 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
CXCL1P09341 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.79□□□□□ -2.12
CXCL1P09341 AC091390.3-201ENST00000426478 338 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 UBE2V1P13-201ENST00000436983 439 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.79□□□□□ -2.12
CXCL1P09341 COX6CP12-201ENST00000446748 202 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 NANOGNBP1-201ENST00000448444 480 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.79□□□□□ -2.12
CXCL1P09341 RPL36AP51-201ENST00000487216 318 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.79□□□□□ -2.12
CXCL1P09341 AC008413.1-201ENST00000511864 177 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 RNA5SP364-201ENST00000516938 78 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 AC109329.2-201ENST00000519658 482 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 AP003102.1-201ENST00000525638 661 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CXCL1P09341 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CXCL1P09341 TRAV28-201ENST00000557548 323 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 CYCSP39-201ENST00000565821 309 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 AC012443.1-201ENST00000605605 231 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 AC055876.5-201ENST00000605667 259 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 AC016542.1-201ENST00000608259 493 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 AC245884.12-201ENST00000615364 59 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
CXCL1P09341 AP006248.3-201ENST00000623580 594 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.79□□□□□ -2.12
CXCL1P09341 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CXCL1P09341 AC130650.2-201ENST00000618736 2403 ntBASIC1.79□□□□□ -2.12
CXCL1P09341 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CXCL1P09341 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
CXCL1P09341 AC022336.2-201ENST00000568966 2538 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 TPTE2P4-201ENST00000258589 1605 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AC111188.2-201ENST00000529697 1387 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
CXCL1P09341 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.78□□□□□ -2.12
CXCL1P09341 MIR649-201ENST00000384843 97 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 ATP5F1P6-201ENST00000402768 767 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 RN7SKP27-201ENST00000410684 333 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AL513331.1-201ENST00000411908 397 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL1P09341 MRPS33P4-201ENST00000434892 317 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL1P09341 AL121871.1-201ENST00000443413 436 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL1P09341 BX248409.1-201ENST00000455497 255 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 RPS20P24-201ENST00000457473 361 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AC087588.1-201ENST00000462203 316 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 FAM133DP-201ENST00000464802 691 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.78□□□□□ -2.12
CXCL1P09341 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL1P09341 SETP12-201ENST00000514068 805 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.78□□□□□ -2.12
CXCL1P09341 RNU6-1095P-201ENST00000516148 108 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 HIGD1AP6-201ENST00000521833 279 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL1P09341 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL1P09341 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL1P09341 AC022080.3-201ENST00000544433 482 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 GLYCAM1-201ENST00000546596 285 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AC079600.2-201ENST00000550076 130 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL1P09341 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL1P09341 AC105137.2-201ENST00000569073 466 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.78□□□□□ -2.12
CXCL1P09341 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.78□□□□□ -2.12
CXCL1P09341 RPS15AP11-201ENST00000594193 385 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.78□□□□□ -2.12
CXCL1P09341 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.78□□□□□ -2.12
CXCL1P09341 AL356280.1-201ENST00000603614 379 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AL109618.2-201ENST00000605527 211 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AL121917.1-203ENST00000605534 577 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AC004852.3-201ENST00000614131 326 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 MIR6075-201ENST00000620782 95 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 UCA1.1-201ENST00000620952 75 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 uc_338.20-201ENST00000621563 178 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AC040168.1-201ENST00000623594 991 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AC083865.1-201ENST00000636634 831 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 ZNF663P-202ENST00000641770 1131 ntBASIC1.78□□□□□ -2.12
CXCL1P09341 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CXCL1P09341 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.78□□□□□ -2.13
CXCL1P09341 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
CXCL1P09341 ENSAP3-201ENST00000312710 333 ntBASIC1.77□□□□□ -2.13
CXCL1P09341 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CXCL1P09341 RNU6-1339P-201ENST00000363574 91 ntBASIC1.77□□□□□ -2.13
CXCL1P09341 RNU6-921P-201ENST00000384361 107 ntBASIC1.77□□□□□ -2.13
CXCL1P09341 SNORA44-201ENST00000384584 132 ntBASIC1.77□□□□□ -2.13
CXCL1P09341 AL139039.1-201ENST00000401900 692 ntBASIC1.77□□□□□ -2.13
CXCL1P09341 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.77□□□□□ -2.13
CXCL1P09341 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.77□□□□□ -2.13
CXCL1P09341 RPL7L1P10-201ENST00000427790 463 ntBASIC1.77□□□□□ -2.13
CXCL1P09341 YME1L1P1-201ENST00000429435 297 ntBASIC1.77□□□□□ -2.13
CXCL1P09341 AC105272.1-201ENST00000438604 198 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms