Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 AL445493.3-201ENST00000619568 477 ntBASIC2.29□□□□□ -2.04
OPN1SWP03999 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.29□□□□□ -2.04
OPN1SWP03999 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
OPN1SWP03999 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
OPN1SWP03999 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.28□□□□□ -2.04
OPN1SWP03999 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
OPN1SWP03999 RNA5SP456-201ENST00000364002 114 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 RNU6-921P-201ENST00000384361 107 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
OPN1SWP03999 SNORD65C-201ENST00000390962 71 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 ARF4P3-201ENST00000397387 509 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 RNU6-712P-201ENST00000410558 100 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.28□□□□□ -2.04
OPN1SWP03999 AL606495.1-201ENST00000422100 813 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 FAM204CP-201ENST00000424489 642 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.28□□□□□ -2.04
OPN1SWP03999 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.28□□□□□ -2.04
OPN1SWP03999 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.28□□□□□ -2.04
OPN1SWP03999 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
OPN1SWP03999 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.28□□□□□ -2.04
OPN1SWP03999 AP000852.1-201ENST00000472460 573 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 RPS4XP6-201ENST00000477670 797 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.28□□□□□ -2.04
OPN1SWP03999 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.28□□□□□ -2.04
OPN1SWP03999 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 RNA5SP320-201ENST00000516263 124 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 AC025881.1-201ENST00000518851 512 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 AC126177.3-201ENST00000551839 688 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 NIFKP8-201ENST00000560500 874 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
OPN1SWP03999 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.28□□□□□ -2.04
OPN1SWP03999 MIR4319-201ENST00000577285 85 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 AC090666.1-201ENST00000578241 445 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 MIR4672-201ENST00000583126 81 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 TPMTP1-201ENST00000592307 737 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.28□□□□□ -2.04
OPN1SWP03999 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
OPN1SWP03999 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.28□□□□□ -2.04
OPN1SWP03999 AC098679.5-201ENST00000624394 571 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.28□□□□□ -2.04
OPN1SWP03999 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.28□□□□□ -2.04
OPN1SWP03999 AC069528.2-201ENST00000624849 1991 ntBASIC2.28□□□□□ -2.04
OPN1SWP03999 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
OPN1SWP03999 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.27□□□□□ -2.05
OPN1SWP03999 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
OPN1SWP03999 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
OPN1SWP03999 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.27□□□□□ -2.05
OPN1SWP03999 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
OPN1SWP03999 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
OPN1SWP03999 MIR21-201ENST00000362134 72 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 RNU6-799P-201ENST00000363567 107 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.27□□□□□ -2.05
OPN1SWP03999 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
OPN1SWP03999 MIR34A-201ENST00000385130 110 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 UBE2V1P2-201ENST00000397758 440 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 FAT1P1-201ENST00000406588 507 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.27□□□□□ -2.05
OPN1SWP03999 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.27□□□□□ -2.05
OPN1SWP03999 AC099677.1-201ENST00000420575 175 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 AC233981.1-201ENST00000423224 461 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.27□□□□□ -2.05
OPN1SWP03999 AL590762.3-201ENST00000436372 640 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 LSM1P1-201ENST00000438629 273 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 AL645638.1-201ENST00000440519 361 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.27□□□□□ -2.05
OPN1SWP03999 HSFY3P-201ENST00000444242 1191 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 AL096803.2-201ENST00000450032 677 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 RNA5SP310-201ENST00000459084 116 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 RPL23AP45-201ENST00000476406 468 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.27□□□□□ -2.05
OPN1SWP03999 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.27□□□□□ -2.05
OPN1SWP03999 PRELID3BP4-201ENST00000515476 571 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 RN7SKP24-201ENST00000515888 284 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 AC027309.2-201ENST00000520566 192 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 AC124293.1-201ENST00000530034 493 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
OPN1SWP03999 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.27□□□□□ -2.05
OPN1SWP03999 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.27□□□□□ -2.05
OPN1SWP03999 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.27□□□□□ -2.05
OPN1SWP03999 SNRPGP1-201ENST00000553864 222 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.27□□□□□ -2.05
OPN1SWP03999 AC079148.1-201ENST00000565944 819 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.27□□□□□ -2.05
OPN1SWP03999 RPL23AP84-201ENST00000571193 464 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.27□□□□□ -2.05
OPN1SWP03999 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.27□□□□□ -2.05
OPN1SWP03999 MIR6076-201ENST00000617521 113 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 AC007275.1-201ENST00000621243 671 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 FO624990.1-201ENST00000636373 85 ntBASIC2.27□□□□□ -2.05
OPN1SWP03999 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
OPN1SWP03999 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
OPN1SWP03999 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
OPN1SWP03999 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.26□□□□□ -2.05
OPN1SWP03999 AC091564.4-201ENST00000533934 2194 ntBASIC2.26□□□□□ -2.05
OPN1SWP03999 AC130650.2-201ENST00000618736 2403 ntBASIC2.26□□□□□ -2.05
OPN1SWP03999 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms