Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX58O95786 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.07□□□□□ -1.76
DDX58O95786 AC098862.1-201ENST00000504991 413 ntBASIC4.07□□□□□ -1.76
DDX58O95786 HMGB3P15-201ENST00000507326 574 ntBASIC4.07□□□□□ -1.76
DDX58O95786 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
DDX58O95786 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX58O95786 SYF2P1-201ENST00000550658 413 ntBASIC4.07□□□□□ -1.76
DDX58O95786 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.07□□□□□ -1.76
DDX58O95786 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX58O95786 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.07□□□□□ -1.76
DDX58O95786 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.07□□□□□ -1.76
DDX58O95786 AC011468.4-201ENST00000603942 409 ntBASIC4.07□□□□□ -1.76
DDX58O95786 AC005000.2-201ENST00000605468 310 ntBASIC4.07□□□□□ -1.76
DDX58O95786 AC112220.3-201ENST00000605502 502 ntBASIC4.07□□□□□ -1.76
DDX58O95786 AL355810.1-201ENST00000614629 552 ntBASIC4.07□□□□□ -1.76
DDX58O95786 AL136981.2-201ENST00000617319 734 ntBASIC4.07□□□□□ -1.76
DDX58O95786 AP002791.1-201ENST00000623291 381 ntBASIC4.07□□□□□ -1.76
DDX58O95786 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
DDX58O95786 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.07□□□□□ -1.76
DDX58O95786 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
DDX58O95786 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
DDX58O95786 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.07□□□□□ -1.76
DDX58O95786 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX58O95786 MTCO1P9-201ENST00000505577 1534 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.06□□□□□ -1.76
DDX58O95786 AC104454.1-201ENST00000421341 1401 ntBASIC4.06□□□□□ -1.76
DDX58O95786 DDX43P2-201ENST00000604753 1354 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX58O95786 ZNF542P-204ENST00000482727 1305 ntBASIC4.06□□□□□ -1.76
DDX58O95786 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
DDX58O95786 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
DDX58O95786 OR1S2-201ENST00000302592 978 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AL161781.1-201ENST00000354277 403 ntBASIC4.06□□□□□ -1.76
DDX58O95786 SNORD113-6-201ENST00000363345 75 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.06□□□□□ -1.76
DDX58O95786 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX58O95786 EZH2P1-201ENST00000431167 291 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX58O95786 RSL24D1P3-201ENST00000449255 495 ntBASIC4.06□□□□□ -1.76
DDX58O95786 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX58O95786 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX58O95786 RPL31P50-201ENST00000471002 296 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AC104563.1-201ENST00000476147 376 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AC006445.1-201ENST00000491925 405 ntBASIC4.06□□□□□ -1.76
DDX58O95786 MTCYBP35-201ENST00000503630 1137 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AC118282.1-201ENST00000506408 765 ntBASIC4.06□□□□□ -1.76
DDX58O95786 ARL2BPP6-201ENST00000512757 439 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AC026407.1-201ENST00000518369 204 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AC103783.1-201ENST00000520506 373 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.06□□□□□ -1.76
DDX58O95786 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
DDX58O95786 ELOCP32-201ENST00000548625 324 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX58O95786 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.06□□□□□ -1.76
DDX58O95786 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX58O95786 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.06□□□□□ -1.76
DDX58O95786 MIR4325-201ENST00000583049 90 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX58O95786 AL022099.1-201ENST00000604551 712 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AL160281.1-201ENST00000605307 311 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AC106028.5-201ENST00000610332 395 ntBASIC4.06□□□□□ -1.76
DDX58O95786 uc_338.25-201ENST00000613756 156 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AL590099.1-201ENST00000615276 138 ntBASIC4.06□□□□□ -1.76
DDX58O95786 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
DDX58O95786 AL445264.1-201ENST00000621719 171 ntBASIC4.06□□□□□ -1.76
DDX58O95786 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DDX58O95786 AC007496.3-201ENST00000624987 3443 ntBASIC4.05□□□□□ -1.76
DDX58O95786 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
DDX58O95786 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
DDX58O95786 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
DDX58O95786 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
DDX58O95786 RNU6-1155P-201ENST00000363554 107 ntBASIC4.05□□□□□ -1.76
DDX58O95786 RNU6-289P-201ENST00000364093 107 ntBASIC4.05□□□□□ -1.76
DDX58O95786 SNORD6-201ENST00000365444 73 ntBASIC4.05□□□□□ -1.76
DDX58O95786 RNU6-253P-201ENST00000384730 105 ntBASIC4.05□□□□□ -1.76
DDX58O95786 MIR320C1-201ENST00000408566 88 ntBASIC4.05□□□□□ -1.76
DDX58O95786 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.05□□□□□ -1.76
DDX58O95786 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX58O95786 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX58O95786 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX58O95786 HMGB3P11-201ENST00000440127 604 ntBASIC4.05□□□□□ -1.76
DDX58O95786 MTND5P14-201ENST00000441481 1267 ntBASIC4.05□□□□□ -1.76
DDX58O95786 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX58O95786 AL671855.1-201ENST00000446875 1203 ntBASIC4.05□□□□□ -1.76
DDX58O95786 AL109741.2-201ENST00000455561 343 ntBASIC4.05□□□□□ -1.76
DDX58O95786 HMGN2P16-201ENST00000456802 261 ntBASIC4.05□□□□□ -1.76
DDX58O95786 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.05□□□□□ -1.76
DDX58O95786 RPS29P2-201ENST00000479278 136 ntBASIC4.05□□□□□ -1.76
DDX58O95786 AC104685.1-201ENST00000502445 371 ntBASIC4.05□□□□□ -1.76
DDX58O95786 AC024589.1-201ENST00000512207 263 ntBASIC4.05□□□□□ -1.76
DDX58O95786 MTCYBP43-201ENST00000513621 740 ntBASIC4.05□□□□□ -1.76
DDX58O95786 RNA5SP216-201ENST00000516111 123 ntBASIC4.05□□□□□ -1.76
DDX58O95786 SNORA31.8-201ENST00000516327 108 ntBASIC4.05□□□□□ -1.76
DDX58O95786 RN7SKP60-201ENST00000516985 239 ntBASIC4.05□□□□□ -1.76
DDX58O95786 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.05□□□□□ -1.76
DDX58O95786 ZNF321P-202ENST00000550843 495 ntBASIC4.05□□□□□ -1.76
DDX58O95786 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.05□□□□□ -1.76
DDX58O95786 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX58O95786 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX58O95786 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms