Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC0.82□□□□□ -2.28
USH2AO75445 AP000907.2-201ENST00000530827 353 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AL161670.1-201ENST00000554348 137 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AC069234.5-201ENST00000611056 416 ntBASIC0.82□□□□□ -2.28
USH2AO75445 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
USH2AO75445 AC025263.3-201ENST00000622965 1396 ntBASIC0.82□□□□□ -2.28
USH2AO75445 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
USH2AO75445 AC002524.1-201ENST00000411687 547 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC0.82□□□□□ -2.28
USH2AO75445 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC0.82□□□□□ -2.28
USH2AO75445 RPS6P15-201ENST00000431996 751 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AL138787.1-202ENST00000437804 898 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC0.82□□□□□ -2.28
USH2AO75445 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC0.82□□□□□ -2.28
USH2AO75445 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC0.82□□□□□ -2.28
USH2AO75445 CBX3P5-201ENST00000552017 521 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AL356575.1-201ENST00000603008 283 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AC002076.2-201ENST00000617362 122 ntBASIC0.82□□□□□ -2.28
USH2AO75445 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
USH2AO75445 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.82□□□□□ -2.28
USH2AO75445 AL159169.1-201ENST00000421119 127 ntBASIC0.82□□□□□ -2.28
USH2AO75445 EZH2P1-201ENST00000431167 291 ntBASIC0.82□□□□□ -2.28
USH2AO75445 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC0.82□□□□□ -2.28
USH2AO75445 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
USH2AO75445 SNORA31.11-201ENST00000516528 139 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC0.82□□□□□ -2.28
USH2AO75445 AC105245.1-201ENST00000581934 244 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AC098848.2-201ENST00000588023 330 ntBASIC0.82□□□□□ -2.28
USH2AO75445 U73479.1-201ENST00000618062 168 ntBASIC0.82□□□□□ -2.28
USH2AO75445 RPL23AP61-201ENST00000623642 466 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
USH2AO75445 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC0.82□□□□□ -2.28
USH2AO75445 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC0.82□□□□□ -2.28
USH2AO75445 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC0.82□□□□□ -2.28
USH2AO75445 AC092185.1-201ENST00000491371 97 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AC034222.1-201ENST00000494052 532 ntBASIC0.82□□□□□ -2.28
USH2AO75445 ZDHHC20P3-201ENST00000531576 336 ntBASIC0.82□□□□□ -2.28
USH2AO75445 SUB1P4-201ENST00000566062 339 ntBASIC0.82□□□□□ -2.28
USH2AO75445 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC0.82□□□□□ -2.28
USH2AO75445 AC025016.1-201ENST00000616746 682 ntBASIC0.82□□□□□ -2.28
USH2AO75445 MIR6788-201ENST00000618842 66 ntBASIC0.82□□□□□ -2.28
USH2AO75445 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
USH2AO75445 AC095050.2-201ENST00000510748 1458 ntBASIC0.81□□□□□ -2.28
USH2AO75445 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
USH2AO75445 Y_RNA.258-201ENST00000364613 105 ntBASIC0.81□□□□□ -2.28
USH2AO75445 RNU6-198P-201ENST00000384258 104 ntBASIC0.81□□□□□ -2.28
USH2AO75445 RNU6-174P-201ENST00000410406 106 ntBASIC0.81□□□□□ -2.28
USH2AO75445 AL445183.3-201ENST00000414168 502 ntBASIC0.81□□□□□ -2.28
USH2AO75445 ARPC3P1-201ENST00000437218 533 ntBASIC0.81□□□□□ -2.28
USH2AO75445 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC0.81□□□□□ -2.28
USH2AO75445 SNRPFP4-201ENST00000456366 242 ntBASIC0.81□□□□□ -2.28
USH2AO75445 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC0.81□□□□□ -2.28
USH2AO75445 AC092851.1-201ENST00000535964 478 ntBASIC0.81□□□□□ -2.28
USH2AO75445 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
USH2AO75445 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
USH2AO75445 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
USH2AO75445 RNU6-1080P-201ENST00000383982 107 ntBASIC0.81□□□□□ -2.28
USH2AO75445 U3.40-201ENST00000408706 208 ntBASIC0.81□□□□□ -2.28
USH2AO75445 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.81□□□□□ -2.28
USH2AO75445 AC096992.1-201ENST00000459808 709 ntBASIC0.81□□□□□ -2.28
USH2AO75445 RPS3AP22-201ENST00000488297 769 ntBASIC0.81□□□□□ -2.28
USH2AO75445 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.81□□□□□ -2.28
USH2AO75445 EEF1B2P4-201ENST00000551398 348 ntBASIC0.81□□□□□ -2.28
USH2AO75445 MTCO1P7-201ENST00000419523 1542 ntBASIC0.81□□□□□ -2.28
USH2AO75445 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC0.81□□□□□ -2.28
USH2AO75445 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
USH2AO75445 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.81□□□□□ -2.28
USH2AO75445 AMD1P1-201ENST00000457220 922 ntBASIC0.81□□□□□ -2.28
USH2AO75445 MIR4644-201ENST00000579929 84 ntBASIC0.81□□□□□ -2.28
USH2AO75445 ZNF734P-201ENST00000419494 1534 ntBASIC0.81□□□□□ -2.28
USH2AO75445 ZNF876P-202ENST00000398732 1485 ntBASIC0.81□□□□□ -2.28
USH2AO75445 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
USH2AO75445 RNA5SP502-201ENST00000362694 119 ntBASIC0.81□□□□□ -2.28
USH2AO75445 RNU1-22P-201ENST00000363334 158 ntBASIC0.81□□□□□ -2.28
USH2AO75445 SNORA7.1-201ENST00000363750 139 ntBASIC0.81□□□□□ -2.28
USH2AO75445 U3.15-201ENST00000365398 212 ntBASIC0.81□□□□□ -2.28
USH2AO75445 PAICSP7-201ENST00000419829 962 ntBASIC0.81□□□□□ -2.28
USH2AO75445 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC0.81□□□□□ -2.28
USH2AO75445 AC009969.1-201ENST00000438726 172 ntBASIC0.81□□□□□ -2.28
USH2AO75445 AC005297.2-201ENST00000450430 606 ntBASIC0.81□□□□□ -2.28
USH2AO75445 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC0.81□□□□□ -2.28
USH2AO75445 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.81□□□□□ -2.28
USH2AO75445 AC015720.1-201ENST00000565251 277 ntBASIC0.81□□□□□ -2.28
USH2AO75445 AC025946.2-201ENST00000603398 234 ntBASIC0.81□□□□□ -2.28
USH2AO75445 AL122125.1-201ENST00000616999 600 ntBASIC0.81□□□□□ -2.28
USH2AO75445 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC0.81□□□□□ -2.28
USH2AO75445 AP001148.1-201ENST00000624124 2359 ntBASIC0.8□□□□□ -2.28
USH2AO75445 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC0.8□□□□□ -2.28
USH2AO75445 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC0.8□□□□□ -2.28
USH2AO75445 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC0.8□□□□□ -2.28
USH2AO75445 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.8□□□□□ -2.28
USH2AO75445 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC0.8□□□□□ -2.28
USH2AO75445 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.8□□□□□ -2.28
USH2AO75445 AC009314.1-201ENST00000603871 304 ntBASIC0.8□□□□□ -2.28
USH2AO75445 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
USH2AO75445 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC0.8□□□□□ -2.28
USH2AO75445 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC0.8□□□□□ -2.28
USH2AO75445 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
USH2AO75445 AL021368.2-201ENST00000606125 5352 ntBASIC0.8□□□□□ -2.28
USH2AO75445 CKS1BP5-201ENST00000434172 273 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms