Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC090615.1-201ENST00000577519 154 ntBASIC3.77□□□□□ -1.81
LDB2O43679 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB2O43679 AC087499.8-201ENST00000578406 226 ntBASIC3.77□□□□□ -1.81
LDB2O43679 MIR3682-201ENST00000581338 84 ntBASIC3.77□□□□□ -1.81
LDB2O43679 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB2O43679 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB2O43679 AC068790.5-201ENST00000602741 355 ntBASIC3.77□□□□□ -1.81
LDB2O43679 AC072046.2-201ENST00000618366 268 ntBASIC3.77□□□□□ -1.81
LDB2O43679 AL596245.1-201ENST00000618994 362 ntBASIC3.77□□□□□ -1.81
LDB2O43679 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB2O43679 MIR4496-201ENST00000635896 61 ntBASIC3.77□□□□□ -1.81
LDB2O43679 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB2O43679 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB2O43679 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LDB2O43679 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LDB2O43679 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB2O43679 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LDB2O43679 ZNF734P-201ENST00000419494 1534 ntBASIC3.76□□□□□ -1.81
LDB2O43679 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.76□□□□□ -1.81
LDB2O43679 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
LDB2O43679 AC095050.2-201ENST00000510748 1458 ntBASIC3.76□□□□□ -1.81
LDB2O43679 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LDB2O43679 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
LDB2O43679 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
LDB2O43679 RNU1-18P-201ENST00000363062 164 ntBASIC3.76□□□□□ -1.81
LDB2O43679 RNVU1-3-201ENST00000364313 161 ntBASIC3.76□□□□□ -1.81
LDB2O43679 AL356421.1-201ENST00000403255 413 ntBASIC3.76□□□□□ -1.81
LDB2O43679 RPL7P25-201ENST00000404151 721 ntBASIC3.76□□□□□ -1.81
LDB2O43679 HSPE1P8-201ENST00000406997 288 ntBASIC3.76□□□□□ -1.81
LDB2O43679 SPA17P1-201ENST00000416656 452 ntBASIC3.76□□□□□ -1.81
LDB2O43679 EIF1P1-201ENST00000421436 341 ntBASIC3.76□□□□□ -1.81
LDB2O43679 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB2O43679 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB2O43679 AL445584.1-201ENST00000431451 330 ntBASIC3.76□□□□□ -1.81
LDB2O43679 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB2O43679 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.76□□□□□ -1.81
LDB2O43679 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB2O43679 RPL7P52-201ENST00000449200 742 ntBASIC3.76□□□□□ -1.81
LDB2O43679 GAPDHP17-201ENST00000449858 1001 ntBASIC3.76□□□□□ -1.81
LDB2O43679 RPL37P6-202ENST00000464216 403 ntBASIC3.76□□□□□ -1.81
LDB2O43679 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
LDB2O43679 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB2O43679 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.76□□□□□ -1.81
LDB2O43679 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.76□□□□□ -1.81
LDB2O43679 RN7SKP244-201ENST00000516513 307 ntBASIC3.76□□□□□ -1.81
LDB2O43679 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB2O43679 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LDB2O43679 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB2O43679 ZNF519P2-201ENST00000557032 169 ntBASIC3.76□□□□□ -1.81
LDB2O43679 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.76□□□□□ -1.81
LDB2O43679 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.76□□□□□ -1.81
LDB2O43679 AC006960.3-201ENST00000561845 705 ntBASIC3.76□□□□□ -1.81
LDB2O43679 AL157394.1-201ENST00000562983 1224 ntBASIC3.76□□□□□ -1.81
LDB2O43679 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.76□□□□□ -1.81
LDB2O43679 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.76□□□□□ -1.81
LDB2O43679 AL161729.4-201ENST00000604650 476 ntBASIC3.76□□□□□ -1.81
LDB2O43679 AL009028.1-201ENST00000604895 802 ntBASIC3.76□□□□□ -1.81
LDB2O43679 AC007684.1-201ENST00000609671 477 ntBASIC3.76□□□□□ -1.81
LDB2O43679 U4.5-201ENST00000617137 123 ntBASIC3.76□□□□□ -1.81
LDB2O43679 AC138649.3-201ENST00000622154 254 ntBASIC3.76□□□□□ -1.81
LDB2O43679 SEPT14P19-203ENST00000633205 211 ntBASIC3.76□□□□□ -1.81
LDB2O43679 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
LDB2O43679 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LDB2O43679 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.75□□□□□ -1.81
LDB2O43679 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.75□□□□□ -1.81
LDB2O43679 AC024560.2-201ENST00000507981 1497 ntBASIC3.75□□□□□ -1.81
LDB2O43679 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LDB2O43679 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LDB2O43679 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.75□□□□□ -1.81
LDB2O43679 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LDB2O43679 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LDB2O43679 Y_RNA.46-201ENST00000362695 102 ntBASIC3.75□□□□□ -1.81
LDB2O43679 RNA5SP258-201ENST00000362750 119 ntBASIC3.75□□□□□ -1.81
LDB2O43679 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
LDB2O43679 MIR124-3-201ENST00000384866 87 ntBASIC3.75□□□□□ -1.81
LDB2O43679 MIR200C-201ENST00000384980 68 ntBASIC3.75□□□□□ -1.81
LDB2O43679 RNA5SP424-201ENST00000390988 115 ntBASIC3.75□□□□□ -1.81
LDB2O43679 MTND4LP20-201ENST00000402379 270 ntBASIC3.75□□□□□ -1.81
LDB2O43679 FCF1P10-201ENST00000407590 479 ntBASIC3.75□□□□□ -1.81
LDB2O43679 RN7SKP177-201ENST00000410567 355 ntBASIC3.75□□□□□ -1.81
LDB2O43679 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LDB2O43679 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.75□□□□□ -1.81
LDB2O43679 ISCA1P1-201ENST00000426679 387 ntBASIC3.75□□□□□ -1.81
LDB2O43679 AL591419.1-201ENST00000427423 339 ntBASIC3.75□□□□□ -1.81
LDB2O43679 OR51AB1P-201ENST00000429046 620 ntBASIC3.75□□□□□ -1.81
LDB2O43679 MTCYBP45-201ENST00000435243 565 ntBASIC3.75□□□□□ -1.81
LDB2O43679 AC009961.2-201ENST00000435771 251 ntBASIC3.75□□□□□ -1.81
LDB2O43679 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.75□□□□□ -1.81
LDB2O43679 RPS20P32-201ENST00000456044 356 ntBASIC3.75□□□□□ -1.81
LDB2O43679 snoU13.8-201ENST00000458890 104 ntBASIC3.75□□□□□ -1.81
LDB2O43679 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.75□□□□□ -1.81
LDB2O43679 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.75□□□□□ -1.81
LDB2O43679 RPL9P6-201ENST00000492764 598 ntBASIC3.75□□□□□ -1.81
LDB2O43679 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.75□□□□□ -1.81
LDB2O43679 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.75□□□□□ -1.81
LDB2O43679 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.75□□□□□ -1.81
LDB2O43679 AC005798.1-201ENST00000513715 387 ntBASIC3.75□□□□□ -1.81
LDB2O43679 AC022483.1-201ENST00000514020 567 ntBASIC3.75□□□□□ -1.81
LDB2O43679 RNU6-201P-201ENST00000517100 61 ntBASIC3.75□□□□□ -1.81
LDB2O43679 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms