Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
SGCEO43556 AC010680.1-201ENST00000590024 3590 ntBASIC2.42□□□□□ -2.02
SGCEO43556 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SGCEO43556 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
SGCEO43556 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
SGCEO43556 RNU6-198P-201ENST00000384258 104 ntBASIC2.42□□□□□ -2.02
SGCEO43556 SNORA44-201ENST00000384584 132 ntBASIC2.42□□□□□ -2.02
SGCEO43556 RNA5SP354-201ENST00000391247 136 ntBASIC2.42□□□□□ -2.02
SGCEO43556 AC096533.1-201ENST00000411645 353 ntBASIC2.42□□□□□ -2.02
SGCEO43556 RPL7L1P10-201ENST00000427790 463 ntBASIC2.42□□□□□ -2.02
SGCEO43556 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.42□□□□□ -2.02
SGCEO43556 AC241584.1-201ENST00000438469 1241 ntBASIC2.42□□□□□ -2.02
SGCEO43556 AC093156.1-201ENST00000440382 670 ntBASIC2.42□□□□□ -2.02
SGCEO43556 RAC1P7-201ENST00000445367 377 ntBASIC2.42□□□□□ -2.02
SGCEO43556 OR51B8P-201ENST00000449892 769 ntBASIC2.42□□□□□ -2.02
SGCEO43556 AL109741.2-201ENST00000455561 343 ntBASIC2.42□□□□□ -2.02
SGCEO43556 GTF2IP12-201ENST00000456547 356 ntBASIC2.42□□□□□ -2.02
SGCEO43556 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.42□□□□□ -2.02
SGCEO43556 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.42□□□□□ -2.02
SGCEO43556 PNPLA4P1-201ENST00000458328 305 ntBASIC2.42□□□□□ -2.02
SGCEO43556 snoU13.22-201ENST00000459428 104 ntBASIC2.42□□□□□ -2.02
SGCEO43556 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.42□□□□□ -2.02
SGCEO43556 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.42□□□□□ -2.02
SGCEO43556 SNORA48.9-201ENST00000516419 162 ntBASIC2.42□□□□□ -2.02
SGCEO43556 CASP1P1-201ENST00000526345 212 ntBASIC2.42□□□□□ -2.02
SGCEO43556 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SGCEO43556 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.42□□□□□ -2.02
SGCEO43556 AP000857.1-201ENST00000532151 543 ntBASIC2.42□□□□□ -2.02
SGCEO43556 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.42□□□□□ -2.02
SGCEO43556 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SGCEO43556 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.42□□□□□ -2.02
SGCEO43556 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SGCEO43556 AC011611.5-201ENST00000552477 578 ntBASIC2.42□□□□□ -2.02
SGCEO43556 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.42□□□□□ -2.02
SGCEO43556 MTATP6P25-201ENST00000574491 261 ntBASIC2.42□□□□□ -2.02
SGCEO43556 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.42□□□□□ -2.02
SGCEO43556 AC133794.1-201ENST00000602731 914 ntBASIC2.42□□□□□ -2.02
SGCEO43556 OR4H6P-202ENST00000603819 340 ntBASIC2.42□□□□□ -2.02
SGCEO43556 AL035413.2-201ENST00000604801 525 ntBASIC2.42□□□□□ -2.02
SGCEO43556 AC008277.2-201ENST00000605196 797 ntBASIC2.42□□□□□ -2.02
SGCEO43556 AC005046.1-201ENST00000608515 625 ntBASIC2.42□□□□□ -2.02
SGCEO43556 AP000254.1-201ENST00000609934 520 ntBASIC2.42□□□□□ -2.02
SGCEO43556 AC140725.3-201ENST00000616193 880 ntBASIC2.42□□□□□ -2.02
SGCEO43556 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
SGCEO43556 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.42□□□□□ -2.02
SGCEO43556 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SGCEO43556 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.41□□□□□ -2.02
SGCEO43556 RNU1-105P-201ENST00000363470 161 ntBASIC2.41□□□□□ -2.02
SGCEO43556 SNORA18.3-201ENST00000384122 132 ntBASIC2.41□□□□□ -2.02
SGCEO43556 SNORD116-23-201ENST00000384645 92 ntBASIC2.41□□□□□ -2.02
SGCEO43556 RNU6-193P-201ENST00000410977 107 ntBASIC2.41□□□□□ -2.02
SGCEO43556 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.41□□□□□ -2.02
SGCEO43556 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.41□□□□□ -2.02
SGCEO43556 FCF1P2-201ENST00000415284 583 ntBASIC2.41□□□□□ -2.02
SGCEO43556 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.41□□□□□ -2.02
SGCEO43556 AC092573.2-201ENST00000434546 243 ntBASIC2.41□□□□□ -2.02
SGCEO43556 ARPC3P1-201ENST00000437218 533 ntBASIC2.41□□□□□ -2.02
SGCEO43556 AL592447.1-201ENST00000447592 540 ntBASIC2.41□□□□□ -2.02
SGCEO43556 AL049714.1-201ENST00000466686 347 ntBASIC2.41□□□□□ -2.02
SGCEO43556 AC011825.1-201ENST00000484967 388 ntBASIC2.41□□□□□ -2.02
SGCEO43556 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.41□□□□□ -2.02
SGCEO43556 RPL30P5-201ENST00000494923 336 ntBASIC2.41□□□□□ -2.02
SGCEO43556 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.41□□□□□ -2.02
SGCEO43556 DYNLL1P6-201ENST00000503440 264 ntBASIC2.41□□□□□ -2.02
SGCEO43556 HIGD1AP13-201ENST00000509878 289 ntBASIC2.41□□□□□ -2.02
SGCEO43556 OR5BM1P-201ENST00000512021 366 ntBASIC2.41□□□□□ -2.02
SGCEO43556 RNA5SP135-201ENST00000517019 125 ntBASIC2.41□□□□□ -2.02
SGCEO43556 RN7SKP40-201ENST00000517211 242 ntBASIC2.41□□□□□ -2.02
SGCEO43556 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.41□□□□□ -2.02
SGCEO43556 AC113192.3-201ENST00000529152 742 ntBASIC2.41□□□□□ -2.02
SGCEO43556 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.41□□□□□ -2.02
SGCEO43556 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.41□□□□□ -2.02
SGCEO43556 ACTR3BP3-201ENST00000565577 979 ntBASIC2.41□□□□□ -2.02
SGCEO43556 AC015688.2-201ENST00000584523 262 ntBASIC2.41□□□□□ -2.02
SGCEO43556 AC004852.3-201ENST00000614131 326 ntBASIC2.41□□□□□ -2.02
SGCEO43556 VN1R9P-201ENST00000614184 867 ntBASIC2.41□□□□□ -2.02
SGCEO43556 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.41□□□□□ -2.02
SGCEO43556 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.41□□□□□ -2.02
SGCEO43556 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SGCEO43556 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SGCEO43556 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
SGCEO43556 GNG5P1-201ENST00000255500 204 ntBASIC2.4□□□□□ -2.03
SGCEO43556 OR5T3-201ENST00000303059 1023 ntBASIC2.4□□□□□ -2.03
SGCEO43556 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.4□□□□□ -2.03
SGCEO43556 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.4□□□□□ -2.03
SGCEO43556 MIR128-1-201ENST00000384921 82 ntBASIC2.4□□□□□ -2.03
SGCEO43556 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.4□□□□□ -2.03
SGCEO43556 AC246680.2-201ENST00000422106 389 ntBASIC2.4□□□□□ -2.03
SGCEO43556 AC087499.2-201ENST00000432861 149 ntBASIC2.4□□□□□ -2.03
SGCEO43556 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.4□□□□□ -2.03
SGCEO43556 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.4□□□□□ -2.03
SGCEO43556 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.4□□□□□ -2.03
SGCEO43556 MTCO1P48-201ENST00000448024 1096 ntBASIC2.4□□□□□ -2.03
SGCEO43556 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.4□□□□□ -2.03
SGCEO43556 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.4□□□□□ -2.03
SGCEO43556 RPL31P60-201ENST00000478450 367 ntBASIC2.4□□□□□ -2.03
SGCEO43556 OR52A4P-202ENST00000481634 799 ntBASIC2.4□□□□□ -2.03
SGCEO43556 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.4□□□□□ -2.03
SGCEO43556 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.4□□□□□ -2.03
SGCEO43556 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms