Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.89□□□□□ -1.79
SMAD6O43541 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.89□□□□□ -1.79
SMAD6O43541 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
SMAD6O43541 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
SMAD6O43541 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMAD6O43541 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMAD6O43541 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SMAD6O43541 CASC19-280ENST00000642102 1351 ntBASIC3.89□□□□□ -1.79
SMAD6O43541 AP004289.2-201ENST00000444413 1457 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
SMAD6O43541 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMAD6O43541 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SMAD6O43541 RNU6-462P-201ENST00000362659 105 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 RNU6-216P-201ENST00000363282 104 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 RNU6-1090P-201ENST00000364065 94 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 Y_RNA.296-201ENST00000364930 108 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 RNU6-1122P-201ENST00000384449 107 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 MT-TL1-201ENST00000386347 75 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 SOD2P1-201ENST00000396543 562 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 RPS3AP36-201ENST00000398190 775 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.88□□□□□ -1.79
SMAD6O43541 Y_RNA.598-201ENST00000410480 95 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.88□□□□□ -1.79
SMAD6O43541 FCF1P2-201ENST00000415284 583 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.88□□□□□ -1.79
SMAD6O43541 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.88□□□□□ -1.79
SMAD6O43541 AC069157.1-201ENST00000421749 137 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.88□□□□□ -1.79
SMAD6O43541 ELOCP14-201ENST00000428070 331 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AC073464.1-201ENST00000429823 534 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 RPL37P21-201ENST00000435890 276 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 ELOCP7-201ENST00000439968 331 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.88□□□□□ -1.79
SMAD6O43541 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.88□□□□□ -1.79
SMAD6O43541 AC078785.3-201ENST00000476607 425 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.88□□□□□ -1.79
SMAD6O43541 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.88□□□□□ -1.79
SMAD6O43541 RNU6-875P-201ENST00000516488 106 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 SNORA67.7-201ENST00000516664 135 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 RNU4-60P-201ENST00000517239 135 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 MTCO2P4-201ENST00000517968 247 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.88□□□□□ -1.79
SMAD6O43541 DEFB131D-201ENST00000526803 184 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 OR5AQ1P-201ENST00000527596 927 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.88□□□□□ -1.79
SMAD6O43541 AK6P1-201ENST00000540219 478 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.88□□□□□ -1.79
SMAD6O43541 AC107016.1-201ENST00000550463 337 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.88□□□□□ -1.79
SMAD6O43541 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.88□□□□□ -1.79
SMAD6O43541 AC141257.3-201ENST00000572906 215 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 MIR3158-1-201ENST00000583596 81 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AL117336.2-201ENST00000602435 335 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AC005344.1-201ENST00000613391 459 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AP001506.1-201ENST00000615444 211 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AC136475.10-201ENST00000620253 385 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AL359880.1-201ENST00000621879 266 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AC048347.1-201ENST00000624621 427 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.88□□□□□ -1.79
SMAD6O43541 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.88□□□□□ -1.79
SMAD6O43541 MIR4496-201ENST00000635896 61 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.88□□□□□ -1.79
SMAD6O43541 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.88□□□□□ -1.79
SMAD6O43541 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SMAD6O43541 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SMAD6O43541 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SMAD6O43541 DBF4P1-201ENST00000412976 1892 ntBASIC3.88□□□□□ -1.79
SMAD6O43541 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMAD6O43541 UBE3AP2-201ENST00000429033 2259 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMAD6O43541 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SMAD6O43541 CBX3P1-201ENST00000325243 554 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 RNU4-76P-201ENST00000364509 141 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 U8.14-201ENST00000390843 143 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 RNU6ATAC-201ENST00000408749 126 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 SNORA57.3-201ENST00000411095 141 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.87□□□□□ -1.79
SMAD6O43541 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.87□□□□□ -1.79
SMAD6O43541 C1DP2-201ENST00000418167 426 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.87□□□□□ -1.79
SMAD6O43541 AL591419.1-201ENST00000427423 339 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SMAD6O43541 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.87□□□□□ -1.79
SMAD6O43541 AL451074.3-201ENST00000437709 472 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 CYCSP43-201ENST00000438233 310 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AC073614.1-201ENST00000438690 650 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 SNORA71B-202ENST00000439232 272 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 Z95327.1-201ENST00000446082 482 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.87□□□□□ -1.79
SMAD6O43541 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AP000852.1-201ENST00000472460 573 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.87□□□□□ -1.79
SMAD6O43541 AC013828.1-201ENST00000481845 158 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AC019235.1-201ENST00000503847 207 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.87□□□□□ -1.79
SMAD6O43541 RAC1P2-201ENST00000511164 579 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 RNU6-583P-201ENST00000516012 92 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.87□□□□□ -1.79
SMAD6O43541 OR5D17P-201ENST00000531492 978 ntBASIC3.87□□□□□ -1.79
SMAD6O43541 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms