Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 RPL7P8-201ENST00000411964 730 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 OR4K6P-201ENST00000416478 897 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 MTATP6P27-201ENST00000416987 621 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 AL590233.1-201ENST00000430017 456 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 EZH2P1-201ENST00000431167 291 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN3O15551 TRIM60P18-201ENST00000441518 828 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN3O15551 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN3O15551 AC108734.3-201ENST00000481241 1165 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 AC108860.1-201ENST00000484521 383 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 VN1R104P-201ENST00000505115 1009 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CLDN3O15551 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.2□□□□□ -1.9
CLDN3O15551 AC093752.1-206ENST00000511823 336 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 RN7SKP43-201ENST00000516173 320 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 RNA5SP380-201ENST00000517190 98 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 OR10V3P-201ENST00000525712 725 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.2□□□□□ -1.9
CLDN3O15551 OR4K8P-201ENST00000578842 1048 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.2□□□□□ -1.9
CLDN3O15551 AC013444.2-201ENST00000603317 787 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 AC015871.2-201ENST00000603605 948 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 DUXAP10-204ENST00000612052 616 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 AC073348.1-201ENST00000623002 331 ntBASIC3.2□□□□□ -1.9
CLDN3O15551 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLDN3O15551 snoZ40.1-201ENST00000364540 72 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 MIR135A2-201ENST00000384854 100 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 RPL5P18-201ENST00000406671 891 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 BEND7P1-201ENST00000422058 457 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 RPL7P46-201ENST00000425129 740 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 AC007742.1-201ENST00000425789 329 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 AC091390.3-201ENST00000426478 338 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 AC024082.2-201ENST00000434771 238 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 ELOCP26-201ENST00000436067 329 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN3O15551 AL590664.1-201ENST00000448065 339 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 AL162389.1-201ENST00000449233 177 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN3O15551 RPS29P26-201ENST00000477483 171 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 RPS3AP14-201ENST00000483907 780 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 RN7SL283P-201ENST00000489055 303 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN3O15551 TMEM251P1-201ENST00000503717 318 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 AC118282.1-201ENST00000506408 765 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN3O15551 MTCYBP16-201ENST00000509187 1129 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 RNU6-1225P-201ENST00000516336 65 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 SNORA70.16-201ENST00000516390 95 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.19□□□□□ -1.9
CLDN3O15551 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN3O15551 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN3O15551 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN3O15551 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.19□□□□□ -1.9
CLDN3O15551 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.19□□□□□ -1.9
CLDN3O15551 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN3O15551 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN3O15551 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN3O15551 DUXAP11-201ENST00000603858 526 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 AC080013.4-201ENST00000607624 649 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN3O15551 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.19□□□□□ -1.9
CLDN3O15551 MTND5P19-201ENST00000424872 1794 ntBASIC3.19□□□□□ -1.9
CLDN3O15551 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CLDN3O15551 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CLDN3O15551 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CLDN3O15551 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN3O15551 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN3O15551 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN3O15551 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN3O15551 NDUFB4P4-201ENST00000404822 243 ntBASIC3.18□□□□□ -1.9
CLDN3O15551 AL356131.1-201ENST00000405826 414 ntBASIC3.18□□□□□ -1.9
CLDN3O15551 RNU2-43P-201ENST00000410306 190 ntBASIC3.18□□□□□ -1.9
CLDN3O15551 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN3O15551 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN3O15551 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN3O15551 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN3O15551 AL139132.1-201ENST00000431587 344 ntBASIC3.18□□□□□ -1.9
CLDN3O15551 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CLDN3O15551 AL359385.1-201ENST00000456509 365 ntBASIC3.18□□□□□ -1.9
CLDN3O15551 AC104472.2-201ENST00000469035 601 ntBASIC3.18□□□□□ -1.9
CLDN3O15551 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN3O15551 AC090453.1-201ENST00000495560 436 ntBASIC3.18□□□□□ -1.9
CLDN3O15551 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN3O15551 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN3O15551 SLC2A13P1-201ENST00000531560 322 ntBASIC3.18□□□□□ -1.9
CLDN3O15551 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.18□□□□□ -1.9
CLDN3O15551 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.18□□□□□ -1.9
CLDN3O15551 HSPE1P3-201ENST00000559254 309 ntBASIC3.18□□□□□ -1.9
CLDN3O15551 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.18□□□□□ -1.9
CLDN3O15551 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN3O15551 AC015688.2-201ENST00000584523 262 ntBASIC3.18□□□□□ -1.9
CLDN3O15551 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN3O15551 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.18□□□□□ -1.9
CLDN3O15551 AC253576.2-201ENST00000618815 580 ntBASIC3.18□□□□□ -1.9
CLDN3O15551 AC097714.1-201ENST00000511272 1647 ntBASIC3.18□□□□□ -1.9
CLDN3O15551 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CLDN3O15551 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.18□□□□□ -1.9
CLDN3O15551 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms