Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGB3O15347 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGB3O15347 AC098679.5-201ENST00000624394 571 ntBASIC1.96□□□□□ -2.1
HMGB3O15347 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGB3O15347 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGB3O15347 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HMGB3O15347 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HMGB3O15347 SEC63P2-201ENST00000503863 1939 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 OR56A5-201ENST00000340110 738 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMGB3O15347 SNORD62.1-201ENST00000362541 86 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 RNU6-270P-201ENST00000364131 105 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 SNORA38.1-201ENST00000364172 131 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 RNVU1-14-201ENST00000384770 164 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 AL138885.1-201ENST00000405921 675 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 Y_RNA.625-201ENST00000411256 107 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.95□□□□□ -2.1
HMGB3O15347 ARL2BPP3-201ENST00000421226 480 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 AL158156.1-201ENST00000422509 473 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGB3O15347 RPL7L1P10-201ENST00000427790 463 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 AL121578.1-201ENST00000428051 892 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 MTCO1P57-201ENST00000432182 261 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 AC087499.2-201ENST00000432861 149 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGB3O15347 ATP5F1P1-201ENST00000433775 569 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGB3O15347 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGB3O15347 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 RNU7-26P-201ENST00000458980 63 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 AC087588.1-201ENST00000462203 316 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 RN7SL807P-201ENST00000470923 297 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGB3O15347 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGB3O15347 NDUFB4P2-201ENST00000509515 391 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 TTC39CP1-201ENST00000512513 755 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 AC112673.1-201ENST00000513168 575 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 AC096725.1-201ENST00000514266 313 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGB3O15347 COX6CP5-201ENST00000527162 228 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 NDUFS5P6-201ENST00000529136 295 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 OR4P1P-201ENST00000530808 1136 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMGB3O15347 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGB3O15347 MIR4697-201ENST00000582977 78 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.95□□□□□ -2.1
HMGB3O15347 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.95□□□□□ -2.1
HMGB3O15347 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.95□□□□□ -2.1
HMGB3O15347 AP005137.2-201ENST00000609238 400 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 AP000254.1-201ENST00000609934 520 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 AC079395.3-201ENST00000615161 484 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 MIR203B-201ENST00000636080 86 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 ZNF663P-202ENST00000641770 1131 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMGB3O15347 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMGB3O15347 AC008568.2-201ENST00000623862 2313 ntBASIC1.95□□□□□ -2.1
HMGB3O15347 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
HMGB3O15347 MIR21-201ENST00000362134 72 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGB3O15347 SNORA48.3-201ENST00000391081 134 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 RPL35AP12-201ENST00000425362 338 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 AL358075.3-201ENST00000426289 226 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.94□□□□□ -2.1
HMGB3O15347 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGB3O15347 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.94□□□□□ -2.1
HMGB3O15347 AC092573.2-201ENST00000434546 243 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
HMGB3O15347 AC090774.1-201ENST00000435925 246 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 MTND2P21-201ENST00000436242 1042 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 IPO7P1-201ENST00000442031 636 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 MTCYBP3-201ENST00000445588 1137 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 PRSS3P4-201ENST00000453323 162 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGB3O15347 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGB3O15347 AC026427.2-201ENST00000506228 536 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGB3O15347 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.94□□□□□ -2.1
HMGB3O15347 AC079600.2-201ENST00000550076 130 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGB3O15347 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGB3O15347 EIF1AXP2-201ENST00000555940 413 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGB3O15347 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGB3O15347 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGB3O15347 AC010738.1-201ENST00000604970 987 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 AC004852.3-201ENST00000614131 326 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGB3O15347 MIR6132-201ENST00000622083 109 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGB3O15347 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 AC025263.3-201ENST00000622965 1396 ntBASIC1.94□□□□□ -2.1
HMGB3O15347 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.94□□□□□ -2.1
HMGB3O15347 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.94□□□□□ -2.1
HMGB3O15347 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMGB3O15347 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
HMGB3O15347 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HMGB3O15347 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.93□□□□□ -2.1
HMGB3O15347 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.93□□□□□ -2.1
HMGB3O15347 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms