Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NPHP1O15259 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NPHP1O15259 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NPHP1O15259 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.31□□□□□ -1.72
NPHP1O15259 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
NPHP1O15259 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.31□□□□□ -1.72
NPHP1O15259 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPHP1O15259 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPHP1O15259 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
NPHP1O15259 ZNF542P-204ENST00000482727 1305 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NPHP1O15259 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.31□□□□□ -1.72
NPHP1O15259 BX119904.4-201ENST00000424402 301 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.31□□□□□ -1.72
NPHP1O15259 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.31□□□□□ -1.72
NPHP1O15259 AL365396.1-201ENST00000430854 671 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.31□□□□□ -1.72
NPHP1O15259 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.31□□□□□ -1.72
NPHP1O15259 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.31□□□□□ -1.72
NPHP1O15259 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.31□□□□□ -1.72
NPHP1O15259 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.31□□□□□ -1.72
NPHP1O15259 AC092754.2-201ENST00000463506 460 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 RPL30P9-201ENST00000465586 330 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.31□□□□□ -1.72
NPHP1O15259 AC022483.1-201ENST00000514020 567 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 RNA5SP341-201ENST00000516261 117 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 EEF1A1P37-201ENST00000522748 715 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 OR5AP1P-201ENST00000529730 940 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.31□□□□□ -1.72
NPHP1O15259 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.31□□□□□ -1.72
NPHP1O15259 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
NPHP1O15259 LARP7P3-201ENST00000579888 337 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.31□□□□□ -1.72
NPHP1O15259 BNIP3P38-201ENST00000601117 544 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 AC011451.2-201ENST00000604303 598 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 AL450489.1-201ENST00000612071 468 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 AC079395.3-201ENST00000615161 484 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.31□□□□□ -1.72
NPHP1O15259 AC092447.10-201ENST00000620607 1652 ntBASIC4.31□□□□□ -1.72
NPHP1O15259 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NPHP1O15259 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NPHP1O15259 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.3□□□□□ -1.72
NPHP1O15259 CR381670.1-201ENST00000624291 1693 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 RNU6-744P-201ENST00000365557 107 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 RNU6-1316P-201ENST00000384242 108 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 RNU6-1207P-201ENST00000384343 107 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 HSPE1P8-201ENST00000406997 288 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 AL591034.1-201ENST00000407447 340 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 RPS3AP24-201ENST00000407896 734 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.3□□□□□ -1.72
NPHP1O15259 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.3□□□□□ -1.72
NPHP1O15259 CCDC58P2-201ENST00000417131 366 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 RPL21P32-201ENST00000419877 477 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 UBE2D3P2-201ENST00000424409 445 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 AC024082.2-201ENST00000434771 238 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.3□□□□□ -1.72
NPHP1O15259 MTCO1P27-201ENST00000448269 226 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 AC097262.1-201ENST00000452559 548 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.3□□□□□ -1.72
NPHP1O15259 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.3□□□□□ -1.72
NPHP1O15259 HSPE1P23-201ENST00000509838 286 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.3□□□□□ -1.72
NPHP1O15259 AC103783.1-201ENST00000520506 373 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.3□□□□□ -1.72
NPHP1O15259 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.3□□□□□ -1.72
NPHP1O15259 AC004024.1-201ENST00000549244 247 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.3□□□□□ -1.72
NPHP1O15259 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.3□□□□□ -1.72
NPHP1O15259 MIR4513-201ENST00000581077 86 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 AC013444.2-201ENST00000603317 787 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 AC106900.2-201ENST00000604994 317 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 RNU6-88P-201ENST00000606801 100 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 AL390240.1-201ENST00000612950 384 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NPHP1O15259 AC009039.2-201ENST00000624524 529 ntBASIC4.3□□□□□ -1.72
NPHP1O15259 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.3□□□□□ -1.72
NPHP1O15259 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC4.3□□□□□ -1.72
NPHP1O15259 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.3□□□□□ -1.72
NPHP1O15259 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.29□□□□□ -1.72
NPHP1O15259 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
NPHP1O15259 AL513185.3-201ENST00000433335 1300 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NPHP1O15259 RNA5SP295-201ENST00000362655 121 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 RNU6-1214P-201ENST00000363650 109 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NPHP1O15259 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.29□□□□□ -1.72
NPHP1O15259 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.29□□□□□ -1.72
NPHP1O15259 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.29□□□□□ -1.72
NPHP1O15259 MTATP6P4-201ENST00000427725 675 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.29□□□□□ -1.72
NPHP1O15259 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.29□□□□□ -1.72
NPHP1O15259 AC236972.1-201ENST00000433225 199 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 AL117351.1-201ENST00000438864 766 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 MTCYBP34-201ENST00000439552 670 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 PAXBP1P1-201ENST00000449315 447 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 SSXP4-201ENST00000451349 245 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 RPL23AP35-201ENST00000451906 501 ntBASIC4.29□□□□□ -1.72
NPHP1O15259 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms