Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MTND4LP10-201ENST00000435146 291 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.43□□□□□ -2.02
UPK1AO00322 UBBP3-201ENST00000445497 241 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.43□□□□□ -2.02
UPK1AO00322 SNORD109B-201ENST00000458961 67 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 RNA5SP310-201ENST00000459084 116 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 SNORD109A-201ENST00000459128 67 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
UPK1AO00322 AC084024.2-201ENST00000503480 791 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.43□□□□□ -2.02
UPK1AO00322 AC027338.1-201ENST00000514840 825 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 RNU6-27P-201ENST00000516146 107 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 RNA5SP402-201ENST00000517148 110 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.43□□□□□ -2.02
UPK1AO00322 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.43□□□□□ -2.02
UPK1AO00322 HSPE1P20-201ENST00000538133 289 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 AC008127.2-201ENST00000549925 1075 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.43□□□□□ -2.02
UPK1AO00322 AC090666.1-201ENST00000578241 445 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.43□□□□□ -2.02
UPK1AO00322 AP001542.2-201ENST00000593141 364 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 VN1R90P-201ENST00000595717 726 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.43□□□□□ -2.02
UPK1AO00322 VN1R92P-201ENST00000598511 928 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.43□□□□□ -2.02
UPK1AO00322 AC098483.2-201ENST00000603158 454 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 AC012669.1-201ENST00000603209 283 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 AC106791.2-201ENST00000604680 391 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 BX649567.1-201ENST00000642071 1134 ntBASIC2.43□□□□□ -2.02
UPK1AO00322 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
UPK1AO00322 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.43□□□□□ -2.02
UPK1AO00322 MTCO1P4-201ENST00000520516 1409 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.42□□□□□ -2.02
UPK1AO00322 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
UPK1AO00322 RNU6-7-201ENST00000364784 107 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 RNU6-8-201ENST00000365467 107 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.42□□□□□ -2.02
UPK1AO00322 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
UPK1AO00322 RNU1-109P-201ENST00000383960 147 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 U3.29-201ENST00000391296 212 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 AL133264.1-201ENST00000407157 562 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 RNU2-52P-201ENST00000410680 190 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 AC092638.1-201ENST00000411966 1275 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 AL136133.1-201ENST00000413694 376 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 RPL31P54-201ENST00000429803 370 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 RPS12P2-201ENST00000439728 269 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 MOB1AP2-201ENST00000446060 614 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 AP000936.2-201ENST00000447151 681 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.42□□□□□ -2.02
UPK1AO00322 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.42□□□□□ -2.02
UPK1AO00322 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.42□□□□□ -2.02
UPK1AO00322 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.42□□□□□ -2.02
UPK1AO00322 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.42□□□□□ -2.02
UPK1AO00322 RPL21P131-201ENST00000497298 483 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.42□□□□□ -2.02
UPK1AO00322 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.42□□□□□ -2.02
UPK1AO00322 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.42□□□□□ -2.02
UPK1AO00322 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
UPK1AO00322 AC006518.2-201ENST00000542513 940 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 SULT1C2P1-202ENST00000562418 459 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 AC093510.2-201ENST00000562820 896 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 AP005205.1-201ENST00000563503 508 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
UPK1AO00322 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.42□□□□□ -2.02
UPK1AO00322 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.42□□□□□ -2.02
UPK1AO00322 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.42□□□□□ -2.02
UPK1AO00322 AL021368.1-201ENST00000607490 540 ntBASIC2.42□□□□□ -2.02
UPK1AO00322 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.42□□□□□ -2.02
UPK1AO00322 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.42□□□□□ -2.02
UPK1AO00322 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.42□□□□□ -2.02
UPK1AO00322 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
UPK1AO00322 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.41□□□□□ -2.02
UPK1AO00322 ZNF271P-202ENST00000465539 1970 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 AP000526.1-201ENST00000603308 1388 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
UPK1AO00322 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
UPK1AO00322 RNU6-859P-201ENST00000362728 107 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 RNU6-251P-201ENST00000363235 104 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 SNORA51.6-201ENST00000384151 125 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.41□□□□□ -2.02
UPK1AO00322 AL590762.3-201ENST00000436372 640 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 AC241584.1-201ENST00000438469 1241 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 AL645638.1-201ENST00000440519 361 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 MTCO1P48-201ENST00000448024 1096 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 AL589880.1-201ENST00000448271 287 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 snoU109.4-201ENST00000458953 143 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.41□□□□□ -2.02
UPK1AO00322 AC096576.1-201ENST00000489014 359 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 AC091860.1-201ENST00000505723 432 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.41□□□□□ -2.02
UPK1AO00322 AC006445.2-201ENST00000510061 472 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 AC096725.1-201ENST00000514266 313 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 SNORA31.1-201ENST00000515993 133 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 SNORA31.5-201ENST00000516190 133 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.41□□□□□ -2.02
UPK1AO00322 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.41□□□□□ -2.02
UPK1AO00322 AC243972.3-201ENST00000539655 198 ntBASIC2.41□□□□□ -2.02
UPK1AO00322 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.41□□□□□ -2.02
UPK1AO00322 MIR5092-201ENST00000583139 88 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms