Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AC107393.1-201ENST00000512403 346 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 IGHVIII-38-1-201ENST00000521454 282 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 MIR5089-201ENST00000580047 84 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AC011712.1-201ENST00000588959 234 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AC091488.1-201ENST00000604239 660 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 CFTRP2-201ENST00000634304 199 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 MTCO1P4-201ENST00000520516 1409 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 HMGB3P30-201ENST00000457863 606 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 RPS29P12-201ENST00000460178 152 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 RPL31P41-201ENST00000477967 372 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AC098848.2-201ENST00000588023 330 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AC096720.1-201ENST00000604441 183 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AC016877.3-201ENST00000606778 504 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 XIST_intron.1-201ENST00000619444 68 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.76□□□□□ -2.13
CNOT1A5YKK6 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CNOT1A5YKK6 AC006378.2-201ENST00000623178 2476 ntBASIC1.75□□□□□ -2.13
CNOT1A5YKK6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CNOT1A5YKK6 MIR1294-201ENST00000408503 142 ntBASIC1.75□□□□□ -2.13
CNOT1A5YKK6 KATNBL1P3-201ENST00000443475 909 ntBASIC1.75□□□□□ -2.13
CNOT1A5YKK6 AP000705.1-201ENST00000454567 350 ntBASIC1.75□□□□□ -2.13
CNOT1A5YKK6 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.75□□□□□ -2.13
CNOT1A5YKK6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.75□□□□□ -2.13
CNOT1A5YKK6 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.75□□□□□ -2.13
CNOT1A5YKK6 IGKV2D-36-201ENST00000518643 226 ntBASIC1.75□□□□□ -2.13
CNOT1A5YKK6 AC007536.1-201ENST00000533382 349 ntBASIC1.75□□□□□ -2.13
CNOT1A5YKK6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.75□□□□□ -2.13
CNOT1A5YKK6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CNOT1A5YKK6 uc_338.5-201ENST00000611839 155 ntBASIC1.75□□□□□ -2.13
CNOT1A5YKK6 AC010678.1-201ENST00000614118 713 ntBASIC1.75□□□□□ -2.13
CNOT1A5YKK6 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CNOT1A5YKK6 AC132825.8-201ENST00000640783 297 ntBASIC1.75□□□□□ -2.13
CNOT1A5YKK6 FAM35CP-201ENST00000554755 2470 ntBASIC1.75□□□□□ -2.13
CNOT1A5YKK6 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CNOT1A5YKK6 MIR6073-201ENST00000352083 89 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CNOT1A5YKK6 RNU2-37P-201ENST00000410695 177 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AC244033.1-201ENST00000426826 870 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 ARF4P2-201ENST00000430209 526 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AC092754.2-201ENST00000463506 460 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 SNRPGP3-201ENST00000469405 227 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.74□□□□□ -2.13
CNOT1A5YKK6 CBX3P4-201ENST00000538909 354 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AL161670.1-201ENST00000554348 137 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CNOT1A5YKK6 MIR4716-201ENST00000579628 84 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AC008687.2-201ENST00000597865 520 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AC010297.1-201ENST00000623948 149 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.74□□□□□ -2.13
CNOT1A5YKK6 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CNOT1A5YKK6 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.74□□□□□ -2.13
CNOT1A5YKK6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AL627390.1-201ENST00000396055 340 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 RNU2-20P-201ENST00000410425 191 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 RPL23AP20-201ENST00000447965 421 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 RPL7P31-201ENST00000450192 724 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AC079776.3-201ENST00000450665 370 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.74□□□□□ -2.13
CNOT1A5YKK6 SNORA25.15-201ENST00000516487 89 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 MIR3670-2-201ENST00000582974 65 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 MIR3670-1-201ENST00000584160 65 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 MIR3670-3-201ENST00000584855 65 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AC123786.2-201ENST00000603459 275 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AC136443.5-201ENST00000603741 370 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AC090953.1-201ENST00000604305 1092 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 MIR3670-4-201ENST00000612260 65 ntBASIC1.74□□□□□ -2.13
CNOT1A5YKK6 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CNOT1A5YKK6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.74□□□□□ -2.13
CNOT1A5YKK6 AC092832.1-201ENST00000422934 400 ntBASIC1.73□□□□□ -2.13
CNOT1A5YKK6 SSXP1-201ENST00000453640 473 ntBASIC1.73□□□□□ -2.13
CNOT1A5YKK6 AC012181.1-201ENST00000479895 423 ntBASIC1.73□□□□□ -2.13
CNOT1A5YKK6 AC092451.1-201ENST00000480211 153 ntBASIC1.73□□□□□ -2.13
CNOT1A5YKK6 AC109486.1-201ENST00000486833 374 ntBASIC1.73□□□□□ -2.13
CNOT1A5YKK6 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.73□□□□□ -2.13
CNOT1A5YKK6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CNOT1A5YKK6 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CNOT1A5YKK6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.73□□□□□ -2.13
CNOT1A5YKK6 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CNOT1A5YKK6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CNOT1A5YKK6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CNOT1A5YKK6 SAR1AP2-201ENST00000392696 594 ntBASIC1.73□□□□□ -2.13
CNOT1A5YKK6 MTCO3P30-201ENST00000426425 670 ntBASIC1.73□□□□□ -2.13
CNOT1A5YKK6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.73□□□□□ -2.13
CNOT1A5YKK6 HMGB3P21-201ENST00000452483 547 ntBASIC1.73□□□□□ -2.13
CNOT1A5YKK6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.73□□□□□ -2.13
CNOT1A5YKK6 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms