Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RN7SL432P-201ENST00000484057 298 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC008628.2-201ENST00000502605 298 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 KLHL2P1-201ENST00000508691 521 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 RNU6-507P-201ENST00000516045 100 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 SNORA31.22-201ENST00000517204 135 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 RNU6-840P-201ENST00000517275 65 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 OR5B10P-201ENST00000532869 642 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC093012.1-202ENST00000549403 582 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 NCAPGP2-201ENST00000557911 754 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 MIR4775-201ENST00000581168 75 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 BNIP3P9-201ENST00000603714 553 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 LARP7P1-201ENST00000605576 316 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC233309.1-201ENST00000619522 751 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC010338.1-201ENST00000621823 717 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 AP005264.7-201ENST00000625003 745 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 BDP1P-201ENST00000582658 1990 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC126323.6-202ENST00000568092 3511 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 OR56B2P-202ENST00000641377 2453 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 MTND5P17-201ENST00000418405 1603 ntBASIC3.3□□□□□ -1.88
IGHV4-28A0A0C4DH34 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 RIOK3P1-201ENST00000418778 1528 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC004925.1-201ENST00000624256 2706 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 Y_RNA.86-201ENST00000363020 111 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 RNU6-960P-201ENST00000364056 120 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 RNU6-701P-201ENST00000384059 107 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 RNU6-1029P-201ENST00000384109 107 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 SNORA24.1-201ENST00000384401 135 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 SNORD37.1-201ENST00000390968 65 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 RAP1BP3-201ENST00000407180 549 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 SNRPFP1-201ENST00000414761 252 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 RPS23P10-201ENST00000416185 486 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 RPL21P111-201ENST00000418453 477 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 MTCO1P39-201ENST00000426148 480 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 USP12PX-201ENST00000432383 1057 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 ISCUP1-201ENST00000454451 448 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AL162395.1-201ENST00000457882 422 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 RPS20P20-201ENST00000460498 340 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC108751.2-201ENST00000469993 231 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 CEACAMP10-202ENST00000495431 496 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 EIF4EP3-201ENST00000498782 656 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 MTCYBP18-201ENST00000501056 747 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 MLLT10P2-201ENST00000506434 249 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC114786.4-201ENST00000508771 728 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 OR51K1P-201ENST00000510214 950 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC105417.1-201ENST00000514691 285 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 RNA5SP503-201ENST00000517047 117 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 SUMO2P20-201ENST00000520803 283 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 SUB1P1-201ENST00000524415 382 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 OR5B19P-201ENST00000531766 928 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC009643.1-201ENST00000532030 391 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 OR4H12P-201ENST00000556269 907 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC084783.1-201ENST00000565846 910 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 FAM60BP-201ENST00000578364 658 ntBASIC3.29□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC015917.1-201ENST00000579654 510 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms