Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 RNU6-89P-201ENST00000606519 100 ntBASIC6.45□□□□□ -1.38
GTF3C3Q9Y5Q9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.45□□□□□ -1.38
GTF3C3Q9Y5Q9 AL357078.3-201ENST00000607528 618 ntBASIC6.45□□□□□ -1.38
GTF3C3Q9Y5Q9 RPSAP73-201ENST00000614820 330 ntBASIC6.45□□□□□ -1.38
GTF3C3Q9Y5Q9 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC6.45□□□□□ -1.38
GTF3C3Q9Y5Q9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
GTF3C3Q9Y5Q9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
GTF3C3Q9Y5Q9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
GTF3C3Q9Y5Q9 AC090740.1-201ENST00000623193 2262 ntBASIC6.45□□□□□ -1.38
GTF3C3Q9Y5Q9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 U3.3-201ENST00000362986 216 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 SNORA70.10-201ENST00000384515 134 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 MIR301A-201ENST00000385261 86 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 SNORA77-201ENST00000408716 125 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 RSU1P3-201ENST00000412878 835 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC099782.1-201ENST00000425889 474 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 HLA-N-201ENST00000437516 135 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC105399.1-202ENST00000447303 205 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 HLA-DPA3-207ENST00000454398 229 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 CEACAMP10-202ENST00000495431 496 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 VWA8P1-201ENST00000510889 176 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC046134.1-201ENST00000514454 666 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 RNA5SP446-201ENST00000515955 82 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 RNU6-615P-201ENST00000516065 106 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 RNU1-61P-201ENST00000516107 151 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 RNA5SP438-201ENST00000516561 112 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC012417.1-201ENST00000582307 1039 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 MIR4424-201ENST00000585257 86 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC093227.2-201ENST00000589357 285 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AL035413.2-201ENST00000604801 525 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC092266.1-201ENST00000610958 165 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 AC090132.2-201ENST00000615881 347 ntBASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
GTF3C3Q9Y5Q9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 RNA5SP273-201ENST00000362484 113 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 RNU6-82P-201ENST00000363970 107 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 RNU1-43P-201ENST00000365052 165 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 CISD1P1-201ENST00000393907 327 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 AL592114.1-201ENST00000403842 483 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 RN7SKP126-201ENST00000411143 300 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 EEF1A1P40-201ENST00000412883 573 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 TRAPPC2P4-201ENST00000421750 331 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 CYCSP6-201ENST00000434498 302 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 EEF1B2P6-201ENST00000445713 673 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 AC114786.4-201ENST00000508771 728 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 RN7SKP70-201ENST00000516655 271 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 AC078814.3-201ENST00000553036 491 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 AC053481.4-201ENST00000583164 216 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 AC012409.3-201ENST00000611343 981 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 AC093913.1-201ENST00000614178 329 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 AC100810.6-201ENST00000638068 285 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 OR56B2P-202ENST00000641377 2453 ntBASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC6.43□□□□□ -1.38
GTF3C3Q9Y5Q9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 AL133383.2-201ENST00000622958 2336 ntBASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 MIR133B-201ENST00000362210 119 ntBASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 Y_RNA.100-201ENST00000363141 102 ntBASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 MIR514A2-201ENST00000385131 88 ntBASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 MIR514A3-201ENST00000385132 88 ntBASIC6.42□□□□□ -1.38
GTF3C3Q9Y5Q9 AL590704.1-201ENST00000402856 794 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms