Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 RN7SKP57-201ENST00000517248 293 ntBASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 OR5G4P-201ENST00000525251 760 ntBASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AC016957.1-201ENST00000534895 309 ntBASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AC136619.2-201ENST00000563361 631 ntBASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AC115621.1-201ENST00000604653 858 ntBASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AC103710.1-201ENST00000610003 901 ntBASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AC138749.5-201ENST00000611461 208 ntBASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AP001506.1-201ENST00000615444 211 ntBASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AC116165.2-201ENST00000616705 206 ntBASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AC103858.2-201ENST00000621471 543 ntBASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AL603839.4-201ENST00000624658 1005 ntBASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 SAGE2P-201ENST00000420011 2126 ntBASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RAI2Q9Y5P3 AC097714.1-201ENST00000511272 1647 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AC012020.1-201ENST00000624541 1728 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AL161781.1-201ENST00000354277 403 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 RNU6-744P-201ENST00000365557 107 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 RNU6-1316P-201ENST00000384242 108 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 U3.26-201ENST00000391236 204 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 RPL21P17-201ENST00000397467 475 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 HLFP1-201ENST00000402375 499 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AC012065.2-201ENST00000421295 375 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AL391219.1-201ENST00000422570 483 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 MTCYBP5-201ENST00000423752 1135 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 OR4F13P-201ENST00000428478 931 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 SNORA71B-202ENST00000439232 272 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 MTCO2P3-201ENST00000442543 421 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AL121877.1-201ENST00000453704 622 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AC133473.1-201ENST00000455173 299 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 RAC1P2-201ENST00000511164 579 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AC009063.1-201ENST00000563342 702 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AC087499.8-201ENST00000578406 226 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 MIR3922-201ENST00000585192 84 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AC068790.5-201ENST00000602741 355 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AC005344.1-201ENST00000613391 459 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AC004009.2-201ENST00000623016 728 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 AL160394.1-201ENST00000624765 724 ntBASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.79
RAI2Q9Y5P3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RAI2Q9Y5P3 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.84□□□□□ -1.8
RAI2Q9Y5P3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.84□□□□□ -1.8
RAI2Q9Y5P3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
RAI2Q9Y5P3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
RAI2Q9Y5P3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.84□□□□□ -1.8
RAI2Q9Y5P3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 Y_RNA.41-201ENST00000362646 102 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 RNU6-853P-201ENST00000364306 107 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AC004987.3-201ENST00000413879 771 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 RPL31P45-201ENST00000419532 356 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 PSMA2P3-201ENST00000429685 675 ntBASIC3.83□□□□□ -1.8
RAI2Q9Y5P3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms