Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RPL31P2-201ENST00000413849 377 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC063979.1-201ENST00000415539 377 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC015977.1-201ENST00000418887 292 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 PPIAP27-201ENST00000453800 265 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 YWHAEP4-201ENST00000505390 198 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 ANXA2P1-201ENST00000505539 926 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AP000859.1-201ENST00000525536 307 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 CYCSP38-201ENST00000559840 322 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC092266.1-201ENST00000610958 165 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC004852.3-201ENST00000614131 326 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC084757.4-201ENST00000616350 526 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 MIR6729-201ENST00000618194 65 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 MIR6130-201ENST00000619419 109 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC129915.3-201ENST00000634128 948 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC015799.1-201ENST00000622996 3122 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC092070.2-203ENST00000598377 3644 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC133552.1-201ENST00000569988 4007 ntBASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCDHB3Q9Y5E6 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AL606537.1-201ENST00000607258 2011 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 DNM1P47-203ENST00000571780 12667 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 RNA5SP346-201ENST00000363541 121 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 Y_RNA.215-201ENST00000364204 112 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 RNA5SP510-201ENST00000364697 99 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AC005522.1-201ENST00000395416 346 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 RNU6-257P-201ENST00000410238 98 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AL358453.1-201ENST00000422522 250 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 RANP8-201ENST00000444720 713 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 REG1CP-206ENST00000447469 496 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 snoU109.4-201ENST00000458953 143 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AC034236.1-201ENST00000469891 373 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 SNORA72.7-201ENST00000516349 94 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 RNU6-426P-201ENST00000516464 97 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 Y_RNA.706-201ENST00000516933 99 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AC091078.2-201ENST00000557145 559 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AC008521.2-201ENST00000591021 259 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AL359881.1-201ENST00000602916 267 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 MIR7159-201ENST00000620587 66 ntBASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
PCDHB3Q9Y5E6 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms