Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 USP9YP36-201ENST00000424581 829 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC007283.2-201ENST00000424739 197 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC133104.1-201ENST00000429100 218 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 SNORA71B-202ENST00000439232 272 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 ARL2BPP10-201ENST00000446487 531 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC073264.2-201ENST00000448886 166 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC006480.1-201ENST00000449887 378 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 VN1R105P-201ENST00000486595 910 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 AL358832.1-201ENST00000497800 389 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 IFITM8P-201ENST00000522529 394 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC022616.3-201ENST00000523940 148 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 ATP5F1P5-201ENST00000526403 760 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC002545.1-201ENST00000592511 181 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC098614.4-201ENST00000607601 462 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 AC004696.1-201ENST00000614345 607 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
DDX56Q9NY93 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
DDX56Q9NY93 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
DDX56Q9NY93 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.52□□□□□ -1.69
DDX56Q9NY93 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
DDX56Q9NY93 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
DDX56Q9NY93 MAPK10-372ENST00000641954 3413 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC011266.1-201ENST00000624119 3569 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
DDX56Q9NY93 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
DDX56Q9NY93 OR5P1P-201ENST00000299512 925 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC073343.1-201ENST00000328239 651 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 Y_RNA.517-201ENST00000384551 106 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.51□□□□□ -1.69
DDX56Q9NY93 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.51□□□□□ -1.69
DDX56Q9NY93 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.51□□□□□ -1.69
DDX56Q9NY93 AL139095.3-201ENST00000419672 1203 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 TMEM167AP1-201ENST00000423409 219 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC020550.1-201ENST00000447385 163 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AL162151.2-201ENST00000448875 158 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 RPL21P126-201ENST00000470049 478 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.51□□□□□ -1.69
DDX56Q9NY93 HMGB3P15-201ENST00000507326 574 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 RNA5SP291-201ENST00000517222 105 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.51□□□□□ -1.69
DDX56Q9NY93 AP003033.1-201ENST00000527244 415 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.51□□□□□ -1.69
DDX56Q9NY93 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC069240.1-201ENST00000548774 375 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC005951.2-201ENST00000576282 495 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 MIR3167-201ENST00000579623 85 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.51□□□□□ -1.69
DDX56Q9NY93 AL136363.2-201ENST00000604173 851 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC012409.3-201ENST00000611343 981 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC013562.2-201ENST00000611632 603 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 uc_338.13-201ENST00000618243 179 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AC073534.2-201ENST00000620377 381 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 AL137003.2-201ENST00000606924 2538 ntBASIC4.51□□□□□ -1.69
DDX56Q9NY93 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
DDX56Q9NY93 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
DDX56Q9NY93 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC066616.2-201ENST00000559334 1481 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 CUL1P1-201ENST00000509510 2425 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC079741.1-201ENST00000321498 212 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 RNA5SP52-201ENST00000362448 134 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 RNA5SP295-201ENST00000362655 121 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 Y_RNA.296-201ENST00000364930 108 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 SNORD6-201ENST00000365444 73 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 RNU5E-6P-201ENST00000365574 115 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
DDX56Q9NY93 AP000567.1-201ENST00000406413 156 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 SNORA11F-201ENST00000408237 128 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 RNU2-66P-201ENST00000410650 161 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 TMSB10P2-201ENST00000416049 131 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AL451054.2-201ENST00000420896 202 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 AL356387.2-201ENST00000422272 243 ntBASIC4.5□□□□□ -1.69
DDX56Q9NY93 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.5□□□□□ -1.69
DDX56Q9NY93 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 190.4 ms