Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 RN7SKP43-201ENST00000516173 320 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 RNA5SP341-201ENST00000516261 117 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 RNU6-1261P-201ENST00000517194 104 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC087373.1-201ENST00000524920 491 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AP003066.2-201ENST00000529375 555 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 CR383656.7-201ENST00000548164 174 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC125611.1-201ENST00000549563 229 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AADACP1-206ENST00000561502 1193 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC023825.1-201ENST00000566704 1030 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 MIR4325-201ENST00000583049 90 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC079089.3-201ENST00000603094 673 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC099785.1-201ENST00000605697 437 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC138932.5-201ENST00000617759 563 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AP000943.4-201ENST00000622912 357 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 AC099506.2-201ENST00000623074 221 ntBASIC2.87□□□□□ -1.95
KLHL28Q9NXS3 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 Z99496.1-201ENST00000469424 1477 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 U8.9-201ENST00000365667 134 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 SNORD65.1-201ENST00000390889 71 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AL079342.2-201ENST00000403367 482 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 RNU4-47P-201ENST00000410876 114 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 RAP1BP1-201ENST00000412709 553 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 RPL27AP8-201ENST00000424277 446 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC013262.1-201ENST00000426710 252 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 SEPT7P5-201ENST00000434048 306 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC093155.1-201ENST00000440164 826 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 RAC1P7-201ENST00000445367 377 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC112492.1-201ENST00000449607 712 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 SUMO2P2-201ENST00000456482 255 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 RN7SL75P-201ENST00000461926 281 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC109925.1-201ENST00000478069 331 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC006445.1-201ENST00000491925 405 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 RPL21P131-201ENST00000497298 483 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 POU5F1P7-201ENST00000508759 541 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC006445.2-201ENST00000510061 472 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AP000889.1-201ENST00000530968 660 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AP000867.2-201ENST00000532468 320 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC087894.1-201ENST00000538359 518 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC125611.2-201ENST00000551907 647 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AL157394.1-201ENST00000562983 1224 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC138915.2-201ENST00000569776 97 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC020895.1-201ENST00000595362 272 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AL445435.1-201ENST00000604232 665 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AL031176.1-201ENST00000604554 466 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC135507.2-201ENST00000612443 309 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 AC009812.4-201ENST00000569134 1805 ntBASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
KLHL28Q9NXS3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 Y_RNA.25-201ENST00000362528 102 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 Y_RNA.111-201ENST00000363248 100 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 FO393413.1-201ENST00000402892 195 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 BMS1P22-201ENST00000414726 313 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 MTCO1P3-201ENST00000429327 192 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 NDUFB4P6-201ENST00000436819 366 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 RN7SL863P-201ENST00000462370 296 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 SETP11-201ENST00000473027 690 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 RN7SL633P-201ENST00000488974 297 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 RNU1-103P-201ENST00000516502 125 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 AC104986.1-201ENST00000517978 436 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 AP003102.1-201ENST00000525638 661 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 OR7K1P-201ENST00000546439 926 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 U73023.1-201ENST00000603134 700 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 AC097504.2-201ENST00000608088 454 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 AC010872.1-201ENST00000624225 675 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 MIR622-201ENST00000638396 96 ntBASIC2.85□□□□□ -1.95
KLHL28Q9NXS3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms