Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AL121579.1-201ENST00000555129 305 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 BNIP3P5-201ENST00000562290 498 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AC055876.1-202ENST00000567053 138 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 MIR5096-201ENST00000583713 70 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AF038458.1-201ENST00000588406 262 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 SNRPGP15-201ENST00000600149 222 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AL121992.2-201ENST00000606262 256 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AC015967.1-201ENST00000619893 476 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 MIR3662-201ENST00000637030 95 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCM2LQ9NUG4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCM2LQ9NUG4 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.4□□□□□ -1.7
CCM2LQ9NUG4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCM2LQ9NUG4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CCM2LQ9NUG4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.4□□□□□ -1.7
CCM2LQ9NUG4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCM2LQ9NUG4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCM2LQ9NUG4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.4□□□□□ -1.7
CCM2LQ9NUG4 ZFRP1-201ENST00000457579 2970 ntBASIC4.4□□□□□ -1.7
CCM2LQ9NUG4 RNU5E-6P-201ENST00000365574 115 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 Y_RNA.381-201ENST00000365666 102 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 SNORA69-201ENST00000383895 132 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 RNA5SP332-201ENST00000391063 115 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AL359634.1-202ENST00000404721 284 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 SNRPFP1-201ENST00000414761 252 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 EI24P1-201ENST00000416584 867 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AL109913.1-201ENST00000421173 514 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 PPP1R11P2-201ENST00000423543 382 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 RWDD4P2-201ENST00000426392 563 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 RPL23AP56-201ENST00000460778 453 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AC126389.1-201ENST00000477436 290 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 RN7SL432P-201ENST00000484057 298 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 RNU6-1092P-201ENST00000516955 87 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 RNU6-835P-201ENST00000516974 104 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AC009643.1-201ENST00000532030 391 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AC012182.1-201ENST00000570133 895 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AC091178.1-203ENST00000584586 279 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AL670379.6-201ENST00000603753 252 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AL670379.11-201ENST00000604059 253 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AL022099.1-201ENST00000604551 712 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AC008162.1-201ENST00000604718 254 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AL670379.1-201ENST00000604752 252 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AL670379.5-201ENST00000605253 252 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AL670379.12-201ENST00000605291 253 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AL670379.8-201ENST00000605353 252 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AL670379.7-201ENST00000605823 252 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AC019193.2-201ENST00000610012 634 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AL023881.1-201ENST00000621088 301 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 GABPAP-201ENST00000419271 1356 ntBASIC4.4□□□□□ -1.71
CCM2LQ9NUG4 AL136164.3-201ENST00000624429 3978 ntBASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 TAB3P1-202ENST00000452645 1634 ntBASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 Y_RNA.38-201ENST00000362617 102 ntBASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 RNA5SP479-201ENST00000364858 117 ntBASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 SNORA23-201ENST00000365128 182 ntBASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 RNA5SP22-201ENST00000365393 109 ntBASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 RNA5SP235-201ENST00000365411 114 ntBASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 AC110754.1-201ENST00000399740 601 ntBASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 Z97832.1-201ENST00000402490 328 ntBASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 RNA5SP118-201ENST00000410385 109 ntBASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCM2LQ9NUG4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms