Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SIX2Q9NPC8 GDI2P1-201ENST00000429312 1336 ntBASIC3.46□□□□□ -1.85
SIX2Q9NPC8 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.46□□□□□ -1.85
SIX2Q9NPC8 AL022578.1-201ENST00000439330 1433 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC092104.1-201ENST00000497346 1441 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 MIR183-201ENST00000384958 110 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 RNU6-952P-201ENST00000391164 108 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AL355379.1-201ENST00000405542 640 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AL138880.1-201ENST00000405824 642 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 HMGB1P11-201ENST00000413899 637 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 TPMTP2-201ENST00000414372 726 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 ZNF885P-201ENST00000420174 1098 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC006366.1-201ENST00000422002 759 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC008065.1-201ENST00000428525 348 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC005019.1-201ENST00000436455 431 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 MTND5P14-201ENST00000441481 1267 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 MTCO1P19-201ENST00000443487 500 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 BMI1P1-201ENST00000445879 941 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 Z75741.1-201ENST00000446793 314 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 SNRPGP9-201ENST00000456025 225 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 SNORA84-201ENST00000459229 133 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 MTND3P5-201ENST00000512798 333 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC022447.1-201ENST00000515358 464 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC068587.4-201ENST00000533893 186 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 RFPL1S-203ENST00000539579 330 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 HIGD1AP1-201ENST00000550979 275 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AL020997.2-201ENST00000602607 184 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC073657.2-201ENST00000605661 303 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC080013.4-201ENST00000607624 649 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC025594.3-201ENST00000613068 790 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AL157817.1-201ENST00000614264 790 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AC009878.1-201ENST00000621819 340 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 BMS1P21-201ENST00000634565 365 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 U6.105-201ENST00000637379 88 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SIX2Q9NPC8 AL049555.1-201ENST00000562834 1933 ntBASIC3.46□□□□□ -1.86
SIX2Q9NPC8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 U3.11-201ENST00000364476 212 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 RPS15AP6-201ENST00000420703 385 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AL389915.1-201ENST00000422463 466 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AL035410.1-201ENST00000427409 427 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC017083.1-201ENST00000428093 483 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 RPL31P50-201ENST00000471002 296 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC093767.1-201ENST00000504523 156 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 MTCO2P32-201ENST00000514865 403 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 MTND5P4-201ENST00000514978 288 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 RNA5SP217-201ENST00000515959 91 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 IGKV2D-23-201ENST00000518179 286 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 PTP4A1P6-201ENST00000531034 478 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AP000873.5-201ENST00000533906 236 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC006362.1-201ENST00000567392 174 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 CKS1BP3-201ENST00000600888 237 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 YWHAQP7-201ENST00000603536 658 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 RPL23AP92-201ENST00000603609 255 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC007566.2-201ENST00000603642 413 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC128687.1-201ENST00000605304 619 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC239868.4-201ENST00000608318 671 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC090425.2-201ENST00000608818 501 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 uc_338.25-201ENST00000613756 156 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC092656.1-203ENST00000624134 423 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SIX2Q9NPC8 AC008725.1-201ENST00000605123 2263 ntBASIC3.45□□□□□ -1.86
SIX2Q9NPC8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms