Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC074140.1-201ENST00000621617 208 ntBASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.36□□□□□ -1.71
SEC61A2Q9H9S3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 INTS6P1-201ENST00000504674 2530 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AL592148.3-201ENST00000608771 2646 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AL139276.1-201ENST00000311910 1001 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-511P-201ENST00000363496 107 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 Y_RNA.167-201ENST00000363735 109 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 RPS4XP9-201ENST00000405151 780 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 RNU2-36P-201ENST00000410361 191 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 ARL5AP1-201ENST00000418991 388 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AL160004.2-201ENST00000432935 350 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC127537.2-201ENST00000439258 465 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 RPL23AP43-201ENST00000446445 471 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC010733.1-201ENST00000451515 401 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC243772.1-201ENST00000451620 410 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 Y_RNA.653-201ENST00000459091 95 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 RPS17P2-201ENST00000461663 408 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC004801.2-202ENST00000463559 283 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 MTATP8P1-201ENST00000467115 207 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC090686.1-201ENST00000481577 749 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 IGLV2-34-201ENST00000490007 283 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AL139099.1-201ENST00000497398 403 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 RNU2-10P-201ENST00000516375 211 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AL133271.1-201ENST00000538229 291 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC110588.1-201ENST00000559699 137 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 CYCSP40-201ENST00000575927 294 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 MIR3149-201ENST00000584629 83 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 VN1R107P-201ENST00000601784 209 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 7SK.7-201ENST00000603504 247 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC005191.1-201ENST00000603950 358 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 CYP2C61P-201ENST00000604072 290 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC087783.2-201ENST00000605070 562 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 Mico1.1-201ENST00000611698 204 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC011155.2-201ENST00000623202 216 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AL138713.1-201ENST00000624026 2130 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AL353662.3-201ENST00000625131 237 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC009643.2-201ENST00000603543 1448 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 AC066616.2-201ENST00000559334 1481 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 MTND5P19-201ENST00000424872 1794 ntBASIC4.35□□□□□ -1.71
SEC61A2Q9H9S3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AL606537.1-201ENST00000607258 2011 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-179P-201ENST00000363350 107 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-1188P-201ENST00000363795 107 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 RNU6-188P-201ENST00000364207 107 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 Y_RNA.401-201ENST00000383965 117 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 MT-TR-201ENST00000387439 65 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AC114491.1-201ENST00000416095 246 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AL135752.1-201ENST00000479477 471 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 RPS27P27-201ENST00000498779 255 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AC140172.1-201ENST00000502928 141 ntBASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
SEC61A2Q9H9S3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms