Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 RNA5SP477-201ENST00000362639 119 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 Y_RNA.350-201ENST00000365409 98 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 SNORD14.1-201ENST00000365609 90 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 RPL21P1-201ENST00000399532 476 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 RN7SKP126-201ENST00000411143 300 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 RPL21P2-201ENST00000440049 481 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AL589765.3-201ENST00000446084 462 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AC008264.1-201ENST00000447612 367 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 ACA64.1-201ENST00000459171 127 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 HMGB1P25-201ENST00000468402 607 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AC087385.1-201ENST00000475062 312 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 RPL7P23-201ENST00000493874 747 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 NDUFB5P1-201ENST00000508134 564 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AC092436.3-201ENST00000511788 257 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 Y_RNA.667-201ENST00000516212 107 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 RNA5SP438-201ENST00000516561 112 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AC125232.2-201ENST00000592457 143 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AL512605.2-201ENST00000592972 256 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 HMGN2P28-201ENST00000606102 262 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 AC141273.2-201ENST00000618989 130 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 MIR6839-201ENST00000620425 113 ntBASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHACTR1Q9C0D0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 Y_RNA.461-201ENST00000384263 103 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 MIR551A-201ENST00000385042 96 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AC097374.1-203ENST00000400783 485 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 RPL12P34-201ENST00000424532 479 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 CYCSP43-201ENST00000438233 310 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AL450023.1-201ENST00000450868 751 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AC144530.1-201ENST00000452862 555 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 RNU6-1132P-201ENST00000459214 107 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AC010683.1-201ENST00000473673 378 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 FTH1P9-201ENST00000513251 355 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 Y_RNA.715-201ENST00000517082 110 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AC090151.1-201ENST00000520784 730 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AP006587.4-201ENST00000526053 529 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 MIR4472-2-201ENST00000582069 67 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 RN7SL356P-201ENST00000582228 248 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AC078899.3-201ENST00000599065 212 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 AC104763.2-201ENST00000604179 382 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 IGHV3-29-201ENST00000604817 344 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 STX3-208ENST00000641815 3236 ntBASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.55□□□□□ -1.52
PHACTR1Q9C0D0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 RNU1-19P-201ENST00000363306 165 ntBASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 RNA5SP435-201ENST00000364044 108 ntBASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 Y_RNA.314-201ENST00000365114 102 ntBASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 SNORA23-201ENST00000365128 182 ntBASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 MT-TC-201ENST00000387405 66 ntBASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.54□□□□□ -1.52
PHACTR1Q9C0D0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms