Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 RNU6-189P-201ENST00000516120 101 ntBASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 RNY3P15-201ENST00000516297 97 ntBASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 AC124068.1-201ENST00000563131 678 ntBASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 AC012603.1-201ENST00000606424 528 ntBASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 MIR6128-201ENST00000615528 109 ntBASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 PISRT1.1-201ENST00000616930 107 ntBASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 AC025034.2-201ENST00000623264 286 ntBASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.69□□□□□ -1.5
UBE2OQ9C0C9 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 AC092681.1-201ENST00000297369 291 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 RNU6-874P-201ENST00000362390 105 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 RNA5SP191-201ENST00000362585 102 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 RNU6-490P-201ENST00000362985 107 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 RNU6-450P-201ENST00000364654 107 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 RNU1-115P-201ENST00000365329 160 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 RNU6-61P-201ENST00000365528 109 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 RPL7P46-201ENST00000425129 740 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 MTCO3P45-201ENST00000443036 613 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 TDGF1P1-201ENST00000445734 527 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 AL162388.1-201ENST00000450912 352 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 PLGLA-201ENST00000465668 449 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 HMGB3P17-201ENST00000504195 649 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 HIGD1AP13-201ENST00000509878 289 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 RNU6-470P-201ENST00000515954 104 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 Y_RNA.670-201ENST00000516255 105 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 Y_RNA.708-201ENST00000516950 96 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 AC007375.1-201ENST00000554513 578 ntBASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE2OQ9C0C9 NXPH1-205ENST00000602349 1953 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AC011755.1-201ENST00000623763 2049 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 RNU1-146P-201ENST00000364015 165 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 RNA5SP515-201ENST00000364570 118 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 Y_RNA.473-201ENST00000384333 102 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 SNORA24.1-201ENST00000384401 135 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 Y_RNA.576-201ENST00000384781 102 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 MIR137-201ENST00000385223 102 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 U3.22-201ENST00000391120 215 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AL136372.1-201ENST00000403060 228 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AL161722.2-201ENST00000434731 981 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 HSFY6P-201ENST00000445573 403 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AC010326.1-201ENST00000462726 602 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 RN7SL319P-201ENST00000480656 221 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 VN1R104P-201ENST00000505115 1009 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AC016559.2-201ENST00000510759 359 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 RNU2-53P-201ENST00000516257 147 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 Y_RNA.680-201ENST00000516441 93 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 MIR4715-201ENST00000584117 79 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AC018462.2-201ENST00000605375 395 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AC008785.1-201ENST00000624475 456 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 AC073869.8-201ENST00000641806 335 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 CDC27P2-201ENST00000425026 1922 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 BDP1P-201ENST00000582658 1990 ntBASIC5.67□□□□□ -1.5
UBE2OQ9C0C9 GVINP1-202ENST00000531871 7271 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms